Basic information
Locus name	AT1G72730
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others( helicase activity)
Effect for Senescence	unclear
Gene Description	eukaryotic translation initiation factor 4A, putative / eIF-4A, putative; FUNCTIONS IN: helicase activity, nucleic acid binding, ATP-dependent helicase activity, ATP binding
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function ATP binding ATP-dependent helicase activity helicase activity nucleic acid binding
Sequence	AT1G72730.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_126984	Accession Taxon NP_001030693 Arabidopsis thaliana NP_001078148 Arabidopsis thaliana NP_175549 Arabidopsis thaliana NP_175829 Arabidopsis thaliana NP_177417 ( AT1G72730 ) Arabidopsis thaliana NP_566469 Arabidopsis thaliana CMK028C Cyanidioschyzon merolae strain 10D 188942 Chlamydomonas reinhardtii NP_113219 Guillardia theta ACO60931 Micromonas sp. RCC299 NP_001045878 Oryza sativa Japonica Group NP_001058481 Oryza sativa Japonica Group NP_001067252 Oryza sativa Japonica Group estExt_gwp_GeneWisePlus.C_Chr_07.00010433 Ostreococcus tauri e_gw1.31.242.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_3830001 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_1360003 Physcomitrella patens subsp. patens estExt_fgenesh2_pg.C_770006 Physcomitrella patens subsp. patens 29706.m001331 Ricinus communis 29863.m001062 Ricinus communis 29912.m005374 Ricinus communis fgenesh1_pg.C_chr_14000061 Thalassiosira pseudonana CCMP1335 XP_002951303 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24031 1.2E-291 17 414 No hit NA ProSiteProfiles PS51195 10.2 41 69 IPR014014 RNA helicase, DEAD-box type, Q motif SMART SM00487 3.6E-55 60 257 IPR014001 Helicase, superfamily 1/2, ATP-binding domain Pfam PF00270 4.2E-40 66 227 IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal ProSiteProfiles PS51192 28.4 72 242 IPR014001 Helicase, superfamily 1/2, ATP-binding domain SUPERFAMILY SSF52540 5.2E-73 110 395 IPR027417 P-loop containing nucleoside triphosphate hydrolase ProSitePatterns PS00039 NA 188 196 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site ProSiteProfiles PS51194 25.4 253 414 IPR001650 Helicase, C-terminal SMART SM00490 2.9E-31 294 375 IPR001650 Helicase, C-terminal Pfam PF00271 2.7E-25 300 375 IPR001650 Helicase, C-terminal
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787