Basic information
Locus name	AT2G39880
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:MYB
Effect for Senescence	Unclear
Gene Description	Upregulated in senescent leaves
Evidence	Molecular evidence:Real-Time PCR [Ref 1]
References	1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B Transcription factors regulating leaf senescence in Arabidopsis thaliana. Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology	molecular function chromatin binding
Sequence	AT2G39880.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_134485	Accession Taxon NP_181517 ( AT2G39880 ) Arabidopsis thaliana NP_187534 Arabidopsis thaliana NP_191132 Arabidopsis thaliana 103798 Chlamydomonas reinhardtii ACO63284 Micromonas sp. RCC299 NP_001044814 Oryza sativa Japonica Group NP_001055277 Oryza sativa Japonica Group e_gw1.13.00.306.1 Ostreococcus tauri e_gw1.53.214.1 Physcomitrella patens subsp. patens e_gw1.72.10.1 Physcomitrella patens subsp. patens 27798.m000612 Ricinus communis 29814.m000736 Ricinus communis XP_002952634 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51294 23.4 45 100 IPR017930 Myb domain SUPERFAMILY SSF46689 6.3E-28 47 143 IPR009057 Homeodomain-like SMART SM00717 1.2E-13 49 98 IPR001005 SANT/Myb domain PANTHER PTHR10641 2.8E-61 50 301 No hit NA Pfam PF00249 1.5E-13 50 95 IPR001005 SANT/Myb domain ProSiteProfiles PS51294 18.5 101 151 IPR017930 Myb domain SMART SM00717 5.7E-12 101 149 IPR001005 SANT/Myb domain Pfam PF00249 5.5E-12 102 146 IPR001005 SANT/Myb domain