Basic information
Locus name	AT3G50060
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:MYB
Effect for Senescence	Unclear
Gene Description	Upregulated in senescent leaves
Evidence	Molecular evidence:Real-Time PCR [Ref 1]
References	1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B Transcription factors regulating leaf senescence in Arabidopsis thaliana. Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology	molecular function chromatin binding
Sequence	AT3G50060.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT3G50060.1  miRNA: ath-miR836 miRNA: ath-miR836 mfe: -29.5 kcal/mol  p-value: 0.007947  position:  356  target 5' U      U A             C  A 3'             CUACGC U AGAGGAAAUGCAG GG              GGUGCG A UUUCCUUUGUGUC CU   miRNA  3'        U G                  5'
Ortholog Group
Ortholog Groups: OG5_188688	Accession Taxon NP_190575 ( AT3G50060 ) Arabidopsis thaliana NP_201531 Arabidopsis thaliana 29970.m000987 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS51294 30.0 1 56 IPR017930 Myb domain PANTHER PTHR10641 7.0E-64 2 235 No hit NA SUPERFAMILY SSF46689 2.1E-31 3 99 IPR009057 Homeodomain-like SMART SM00717 3.2E-18 5 54 IPR001005 SANT/Myb domain Pfam PF00249 2.7E-17 6 51 IPR001005 SANT/Myb domain SMART SM00717 4.2E-14 57 105 IPR001005 SANT/Myb domain ProSiteProfiles PS51294 19.2 58 107 IPR017930 Myb domain Pfam PF00249 2.0E-14 60 102 IPR001005 SANT/Myb domain
Mutant Image
normal leaf senescence