Basic information
Locus name	AT1G77840
Alias	eIF-5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others( translation )
Effect for Senescence	unclear
Gene Description	eukaryotic translation initiation factor 5, putative / eIF-5, putative; FUNCTIONS IN: binding, translation initiation factor activity; INVOLVED IN: translational initiation, regulation of translational initiation
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process translational initiation molecular function protein binding translation initiation factor activity
Sequence	AT1G77840.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127779	Accession Taxon NP_174877 Arabidopsis thaliana NP_177907 ( AT1G77840 ) Arabidopsis thaliana CMH058C Cyanidioschyzon merolae strain 10D 142465 Chlamydomonas reinhardtii ACO61327 Micromonas sp. RCC299 NP_001062885 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_Chr_07.00010263 Ostreococcus tauri estExt_gwp_gw1.C_930085 Physcomitrella patens subsp. patens gw1.626.1.1 Physcomitrella patens subsp. patens 29908.m005952 Ricinus communis estExt_gwp_gw1.C_chr_20784 Thalassiosira pseudonana CCMP1335 XP_002959004 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23001 5.3E-163 1 437 No hit NA Pfam PF01873 1.2E-39 4 129 IPR002735 Translation initiation factor IF2/IF5 SUPERFAMILY SSF100966 2.9E-21 10 101 IPR016189 Translation initiation factor IF2/IF5, N-terminal SMART SM00653 3.2E-61 15 129 IPR002735 Translation initiation factor IF2/IF5 SUPERFAMILY SSF75689 1.1E-6 98 133 IPR016190 Translation initiation factor IF2/IF5, zinc-binding ProSiteProfiles PS51363 27.5 278 436 IPR003307 W2 domain SUPERFAMILY SSF48371 2.9E-27 287 430 IPR016024 Armadillo-type fold SMART SM00515 9.0E-35 342 432 IPR003307 W2 domain Pfam PF02020 2.6E-23 356 437 IPR003307 W2 domain
Subcellular Localization
Localization 1 Localization cytoplasm and nucleus Evidence Localization with GFP-ORF fusion protein (GFP:cDNA) Pubmed ID 15610358
Localization 2 Localization cytosol Evidence SUBAcon Pubmed ID 23180787