Basic information
Locus name	AT1G63800
Alias	UBC5
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category
Effect for Senescence	delay
Gene Description	Arabidopsis Ubiquitin-Conjugating Enzymes UBC4, UBC5, and UBC6 Have Major Functions in Sugar Metabolism and Leaf Senescence.the ubc4/5/6 mutant plants showed early leaf senescence at late stages of plant development as well as accelerated leaf senescence using detached leaves.
Evidence	Genetic evidence [Ref 1]
References	1:
Gene Ontology	molecular function acid-amino acid ligase activity
Pathway
Mutant information
Mutant name	ubc4/5/6
Mutant/Transgenic
Ecotype	Col-0
Mutagenesis type	T-DNA
Ortholog Group
Ortholog Groups: OG5_128230	Accession Taxon NP_564817 ( AT1G63800 ) Arabidopsis thaliana NP_566062 Arabidopsis thaliana NP_568589 Arabidopsis thaliana CMH227C Cyanidioschyzon merolae strain 10D 183594 Chlamydomonas reinhardtii NP_001064719 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_370098 Physcomitrella patens subsp. patens estExt_fgenesh1_pm.C_1610010 Physcomitrella patens subsp. patens 29822.m003370 Ricinus communis 30147.m013985 Ricinus communis 30174.m008626 Ricinus communis 30190.m011244 Ricinus communis XP_002955388 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24067 5.1E-109 1 180 No hit NA SMART SM00212 1.1E-54 4 148 No hit NA SUPERFAMILY SSF54495 6.2E-47 4 148 IPR016135 Ubiquitin-conjugating enzyme/RWD-like Pfam PF00179 2.2E-38 10 142 IPR000608 Ubiquitin-conjugating enzyme, E2 ProSiteProfiles PS50127 33.9 26 137 IPR000608 Ubiquitin-conjugating enzyme, E2 ProSitePatterns PS00183 NA 73 89 IPR023313 Ubiquitin-conjugating enzyme, active site
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787