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Locus name | AT1G11190 |
Alias | ENDO1/BFN1 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | |
Effect for Senescence | promote |
Gene Description | The increased expression of ENDO1 accelerates senescence |
Evidence | Genetic evidence [Ref 1] |
References | 1: |
Gene Ontology | |
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Mutant name |
BFN1-OE |
Mutant/Transgenic |
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Ecotype |
Col-0 |
Mutagenesis type |
transgene |
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Sampling |
Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ. Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4) |
Comparation |
Legends: Col: wild type, indicates the ratio of expression in senescing leaves/green leaves. NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type. D/L: ratio of DARK 5d/control. CD: Cell Death, ratio of starved cell suspension culture/control. Genes showing at least 3 fold (ratio) up regulation during leaf senescence. |
miRNA Interaction | |
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Details | | target: AT1G11190.1 miRNA: ath-miR156a miRNA: ath-miR156a mfe: -30.9 kcal/mol p-value: 0.001575
position: 143 target 5' U G C 3' GUGUUCG UUUCUUCUGUC CACGAGU AGAGAAGACAG miRNA 3' G U 5'
target: AT1G11190.1 miRNA: ath-miR156b miRNA: ath-miR156b mfe: -30.9 kcal/mol p-value: 0.001155
position: 143 target 5' U G C 3' GUGUUCG UUUCUUCUGUC CACGAGU AGAGAAGACAG miRNA 3' G U 5'
target: AT1G11190.1 miRNA: ath-miR156c miRNA: ath-miR156c mfe: -30.9 kcal/mol p-value: 0.001516
position: 143 target 5' U G C 3' GUGUUCG UUUCUUCUGUC CACGAGU AGAGAAGACAG miRNA 3' G U 5'
target: AT1G11190.1 miRNA: ath-miR156d miRNA: ath-miR156d mfe: -30.9 kcal/mol p-value: 0.001665
position: 143 target 5' U G C 3' GUGUUCG UUUCUUCUGUC CACGAGU AGAGAAGACAG miRNA 3' G U 5'
target: AT1G11190.1 miRNA: ath-miR156e miRNA: ath-miR156e mfe: -30.9 kcal/mol p-value: 0.001065
position: 143 target 5' U G C 3' GUGUUCG UUUCUUCUGUC CACGAGU AGAGAAGACAG miRNA 3' G U 5'
target: AT1G11190.1 miRNA: ath-miR156f miRNA: ath-miR156f mfe: -30.9 kcal/mol p-value: 0.001585
position: 143 target 5' U G C 3' GUGUUCG UUUCUUCUGUC CACGAGU AGAGAAGACAG miRNA 3' G U 5'
target: AT1G11190.1 miRNA: ath-miR156g miRNA: ath-miR156g mfe: -31.2 kcal/mol p-value: 0.000873
position: 143 target 5' U G C 3' GUGUUCG UUUCUUCUGUC CACGAGU AGAGAAGACAG miRNA 3' G C 5'
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Ortholog Group | |
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Ortholog Groups: OG5_128720 | |
Cross Link | |
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Localization | extracellular |
Evidence | SUBAcon |
Pubmed ID | 23180787 |