Basic information
Locus name	AT2G06530
Alias	VPS2.1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others(transport)
Effect for Senescence	unclear
Gene Description	vacuolar protein sorting-associated protein VPS2.1; INVOLVED IN: vesicle-mediated transport
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process protein transport
Sequence	AT2G06530.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128111	Accession Taxon NP_565336 ( AT2G06530 ) Arabidopsis thaliana CMB008C Cyanidioschyzon merolae strain 10D 185193 Chlamydomonas reinhardtii ACO68543 Micromonas sp. RCC299 NP_001059248 Oryza sativa Japonica Group NP_001068537 Oryza sativa Japonica Group estExt_gwp_gw1.C_520101 Physcomitrella patens subsp. patens 29706.m001300 Ricinus communis 29912.m005282 Ricinus communis estExt_gwp_gw1.C_chr_10657 Thalassiosira pseudonana CCMP1335 XP_002951144 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10476 8.3E-126 1 225 No hit NA Coils Coil NA 13 55 No hit NA Pfam PF03357 4.8E-47 18 187 IPR005024 Snf7 Coils Coil NA 120 141 No hit NA
Subcellular Localization
Localization 1 Localization unidentified organelle Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization cytosol,golgi Evidence SUBAcon Pubmed ID 23180787