Basic information
Locus name	AT1G62700
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:NAC
Effect for Senescence	Unclear
Gene Description	Upregulated in senescent leaves
Evidence	Molecular evidence:Real-Time PCR [Ref 1]
References	1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B Transcription factors regulating leaf senescence in Arabidopsis thaliana. Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function DNA binding
Sequence	AT1G62700.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT1G62700.1  miRNA: ath-miR780 miRNA: ath-miR780 mfe: -25.4 kcal/mol  p-value: 0.007521  position:  449  target 5' U    A         A      A 3'             AUGU GGGUAUUCA GAAGAA              UACG UCUAUAAGU CUUCUU   miRNA  3'      G         G        5'
Ortholog Group
Ortholog Groups: OG5_140455	Accession Taxon NP_172690 Arabidopsis thaliana NP_176457 ( AT1G62700 ) Arabidopsis thaliana NP_001053424 Oryza sativa Japonica Group NP_001056549 Oryza sativa Japonica Group NP_001060775 Oryza sativa Japonica Group e_gw1.161.49.1 Physcomitrella patens subsp. patens e_gw1.201.156.1 Physcomitrella patens subsp. patens e_gw1.70.85.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_2230002 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_182000024 Physcomitrella patens subsp. patens gw1.1.690.1 Physcomitrella patens subsp. patens gw1.6.394.1 Physcomitrella patens subsp. patens gw1.77.154.1 Physcomitrella patens subsp. patens 28200.m000189 Ricinus communis 30147.m014211 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31989 1.3E-114 1 316 No hit NA SUPERFAMILY SSF101941 2.1E-59 5 156 IPR003441 No apical meristem (NAM) protein Pfam PF02365 1.9E-53 7 136 IPR003441 No apical meristem (NAM) protein ProSiteProfiles PS51005 58.0 7 156 IPR003441 No apical meristem (NAM) protein