Basic information
Locus name	AT2G15900
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Signal transduction
Effect for Senescence	unclear
Gene Description	phox (PX) domain-containing protein; FUNCTIONS IN: phosphoinositide binding; INVOLVED IN: signal transduction, intracellular signaling cascade
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process cell communication molecular function phosphatidylinositol binding protein binding
Sequence	AT2G15900.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G15900.1  miRNA: ath-miR5654-3p miRNA: ath-miR5654-3p mfe: -31.8 kcal/mol  p-value: 0.003601  position: 1484  target 5' U                  G    U  3'             AAUAAAUCCCAAAGCAUU UUCU                 UUAUUUAGGGUUUCGUAG AAGG      miRNA  3'                         U  5'
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22999 0.0 1 988 No hit NA Pfam PF02194 2.2E-56 105 289 IPR003114 Phox-associated domain ProSiteProfiles PS51207 49.7 105 288 IPR003114 Phox-associated domain SMART SM00313 1.1E-5 105 291 IPR013996 PX-associated, sorting nexin 13 ProSiteProfiles PS50195 16.7 511 623 IPR001683 Phox homologous domain SMART SM00312 4.8E-8 511 619 IPR001683 Phox homologous domain SUPERFAMILY SSF64268 4.5E-23 512 619 IPR001683 Phox homologous domain Pfam PF00787 7.2E-20 520 617 IPR001683 Phox homologous domain Pfam PF08628 2.0E-16 815 958 IPR013937 Sorting nexin, C-terminal
Subcellular Localization
Localization	plasma membrane
Evidence	SUBAcon
Pubmed ID	23180787