Basic information
Locus name	AT2G17390
Alias	AKR2B
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	ANKYRIN REPEAT-CONTAINING 2B (AKR2B); FUNCTIONS IN: protein binding, transcription regulator activity; LOCATED IN: plasma membrane
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT2G17390.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G17390.1  miRNA: ath-miR5014a-5p miRNA: ath-miR5014a-5p mfe: -27.7 kcal/mol  p-value: 0.000467  position: 681  target 5' U                    A  3'             GUGUUG GCAAAGCUGGGUG                 UACAAC UGUUUUGAUUCAC      miRNA  3'        A             A  5'
Ortholog Group
Ortholog Groups: OG5_134805	Accession Taxon NP_179331 ( AT2G17390 ) Arabidopsis thaliana NP_195270 Arabidopsis thaliana NP_849497 Arabidopsis thaliana NP_849498 Arabidopsis thaliana NP_849499 Arabidopsis thaliana 127770 Chlamydomonas reinhardtii 205780 Chlamydomonas reinhardtii ACO69642 Micromonas sp. RCC299 NP_001051917 Oryza sativa Japonica Group NP_001063647 Oryza sativa Japonica Group gw1.01.00.395.1 Ostreococcus tauri estExt_fgenesh1_kg.C_80001 Physcomitrella patens subsp. patens 30162.m001264 Ricinus communis XP_002949641 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR24193 1.1E-25 207 338 No hit NA ProSiteProfiles PS50297 33.8 219 338 IPR020683 Ankyrin repeat-containing domain SMART SM00248 1,300.0 219 248 IPR002110 Ankyrin repeat SUPERFAMILY SSF48403 2.2E-32 219 338 IPR020683 Ankyrin repeat-containing domain ProSiteProfiles PS50088 13.6 252 284 IPR002110 Ankyrin repeat SMART SM00248 2.4E-4 252 281 IPR002110 Ankyrin repeat Pfam PF13857 2.1E-13 272 326 No hit NA ProSiteProfiles PS50088 12.5 285 317 IPR002110 Ankyrin repeat SMART SM00248 2.8E-5 285 314 IPR002110 Ankyrin repeat
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787