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About
Basic information
Locus name
AT3G49930
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:C2H2
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
molecular function
zinc ion binding
Sequence
AT3G49930.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_212501
Accession
Taxon
NP_190562
( AT3G49930 )
Arabidopsis thaliana
NP_201546
Arabidopsis thaliana
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR26374
4.6E-45
54
184
No hit
NA
SUPERFAMILY
SSF57667
2.2E-9
92
116
No hit
NA
Pfam
PF13912
4.7E-12
94
118
No hit
NA
ProSiteProfiles
PS50157
10.8
94
121
IPR007087
Zinc finger, C2H2
SMART
SM00355
0.0
94
116
IPR015880
Zinc finger, C2H2-like
ProSitePatterns
PS00028
NA
96
116
IPR007087
Zinc finger, C2H2
SUPERFAMILY
SSF57667
2.2E-9
144
171
No hit
NA
Pfam
PF13912
2.4E-8
148
173
No hit
NA
ProSiteProfiles
PS50157
8.9
149
171
IPR007087
Zinc finger, C2H2
SMART
SM00355
1.2
149
171
IPR015880
Zinc finger, C2H2-like
ProSitePatterns
PS00028
NA
151
171
IPR007087
Zinc finger, C2H2
Mutant Image
normal leaf senescence