Basic information
Locus name	AT2G18600
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	RUB1-conjugating enzyme, putative; FUNCTIONS IN: ubiquitin-protein ligase activity, small conjugating protein ligase activity, acid-amino acid ligase activity, ATP binding; INVOLVED IN: regulation of protein metabolic process, protein modification process, post-translational protein modification
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function acid-amino acid ligase activity
Pathway
Sequence	AT2G18600.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128611	Accession Taxon NP_001154289 Arabidopsis thaliana NP_565440 ( AT2G18600 ) Arabidopsis thaliana NP_568008 Arabidopsis thaliana CME162C Cyanidioschyzon merolae strain 10D 692 Chlamydomonas reinhardtii ACO65021 Micromonas sp. RCC299 NP_001061664 Oryza sativa Japonica Group NP_001062859 Oryza sativa Japonica Group NP_001064273 Oryza sativa Japonica Group fgenesh1_pm.C_Chr_04.0001000048 Ostreococcus tauri estExt_Genewise1.C_1020079 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_520096 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_610084 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_6000135 Physcomitrella patens subsp. patens gw1.45.181.1 Physcomitrella patens subsp. patens 29646.m001060 Ricinus communis estExt_fgenesh1_pg.C_chr_20094 Thalassiosira pseudonana CCMP1335 XP_002958085 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF54495 9.5E-49 16 183 IPR016135 Ubiquitin-conjugating enzyme/RWD-like PANTHER PTHR24067 7.2E-82 28 172 No hit NA ProSiteProfiles PS50127 26.9 34 165 IPR000608 Ubiquitin-conjugating enzyme, E2 SMART SM00212 1.7E-33 34 176 No hit NA Pfam PF00179 3.3E-36 35 169 IPR000608 Ubiquitin-conjugating enzyme, E2 ProSitePatterns PS00183 NA 103 118 IPR023313 Ubiquitin-conjugating enzyme, active site