Basic information
Locus name	AT2G18780
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Protein degradation/modification
Effect for Senescence	unclear
Gene Description	F-box family protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT2G18780.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G18780.1  miRNA: ath-miR859 miRNA: ath-miR859 mfe: -36.8 kcal/mol  p-value: 0.000084  position: 734  target 5' U                     U  3'             UUUGAUUUCACAACGGAGAGA                 AAACUGAAGUGUUGUCUCUCU      miRNA  3'                          5'
Ortholog Group
Ortholog Groups: OG5_127192	Accession Taxon NP_001030727 Arabidopsis thaliana NP_001030837 Arabidopsis thaliana NP_001078185 Arabidopsis thaliana NP_001117347 Arabidopsis thaliana NP_001117348 Arabidopsis thaliana NP_001117350 Arabidopsis thaliana NP_001117352 Arabidopsis thaliana NP_001154501 Arabidopsis thaliana NP_172628 Arabidopsis thaliana NP_172646 Arabidopsis thaliana NP_172681 Arabidopsis thaliana NP_172683 Arabidopsis thaliana NP_174436 Arabidopsis thaliana NP_174493 Arabidopsis thaliana NP_174521 Arabidopsis thaliana NP_175464 Arabidopsis thaliana NP_176106 Arabidopsis thaliana NP_176172 Arabidopsis thaliana NP_176177 Arabidopsis thaliana NP_176417 Arabidopsis thaliana NP_176774 Arabidopsis thaliana NP_176822 Arabidopsis thaliana NP_176912 Arabidopsis thaliana NP_177888 Arabidopsis thaliana NP_178727 Arabidopsis thaliana NP_178729 Arabidopsis thaliana NP_178884 Arabidopsis thaliana NP_179078 Arabidopsis thaliana NP_179323 Arabidopsis thaliana NP_179373 Arabidopsis thaliana NP_179468 ( AT2G18780 ) Arabidopsis thaliana NP_180027 Arabidopsis thaliana NP_181393 Arabidopsis thaliana NP_187075 Arabidopsis thaliana NP_187487 Arabidopsis thaliana NP_187654 Arabidopsis thaliana NP_187980 Arabidopsis thaliana NP_187998 Arabidopsis thaliana NP_187999 Arabidopsis thaliana NP_188019 Arabidopsis thaliana NP_188223 Arabidopsis thaliana NP_188281 Arabidopsis thaliana NP_188305 Arabidopsis thaliana NP_188313 Arabidopsis thaliana NP_188353 Arabidopsis thaliana NP_188354 Arabidopsis thaliana NP_188358 Arabidopsis thaliana NP_188366 Arabidopsis thaliana NP_188375 Arabidopsis thaliana NP_188376 Arabidopsis thaliana NP_188377 Arabidopsis thaliana NP_188380 Arabidopsis thaliana NP_188381 Arabidopsis thaliana NP_188383 Arabidopsis thaliana NP_188384 Arabidopsis thaliana NP_188389 Arabidopsis thaliana NP_188440 Arabidopsis thaliana NP_188461 Arabidopsis thaliana NP_188462 Arabidopsis thaliana NP_188463 Arabidopsis thaliana NP_188520 Arabidopsis thaliana NP_188521 Arabidopsis thaliana NP_188572 Arabidopsis thaliana NP_188590 Arabidopsis thaliana NP_188622 Arabidopsis thaliana NP_188623 Arabidopsis thaliana NP_188638 Arabidopsis thaliana NP_188675 Arabidopsis thaliana NP_188705 Arabidopsis thaliana NP_188706 Arabidopsis thaliana NP_188707 Arabidopsis thaliana NP_188749 Arabidopsis thaliana NP_188750 Arabidopsis thaliana NP_188754 Arabidopsis thaliana NP_188874 Arabidopsis thaliana NP_188904 Arabidopsis thaliana NP_188909 Arabidopsis thaliana NP_188910 Arabidopsis thaliana NP_188911 Arabidopsis thaliana NP_188912 Arabidopsis thaliana NP_188916 Arabidopsis thaliana NP_188927 Arabidopsis thaliana NP_188934 Arabidopsis thaliana NP_188967 Arabidopsis thaliana NP_188984 Arabidopsis thaliana NP_189010 Arabidopsis thaliana NP_189101 Arabidopsis thaliana NP_189113 Arabidopsis thaliana NP_189145 Arabidopsis thaliana NP_189173 Arabidopsis thaliana NP_189998 Arabidopsis thaliana NP_189999 Arabidopsis thaliana NP_190520 Arabidopsis thaliana NP_190521 Arabidopsis thaliana NP_190567 Arabidopsis thaliana NP_191518 Arabidopsis thaliana NP_191520 Arabidopsis thaliana NP_192725 Arabidopsis thaliana NP_192757 Arabidopsis thaliana NP_192812 Arabidopsis thaliana NP_193453 Arabidopsis thaliana NP_195055 Arabidopsis thaliana NP_198468 Arabidopsis thaliana NP_198469 Arabidopsis thaliana NP_198520 Arabidopsis thaliana NP_198964 Arabidopsis thaliana NP_198965 Arabidopsis thaliana NP_198966 Arabidopsis thaliana NP_199061 Arabidopsis thaliana NP_199541 Arabidopsis thaliana NP_199913 Arabidopsis thaliana NP_200864 Arabidopsis thaliana NP_201089 Arabidopsis thaliana NP_564505 Arabidopsis thaliana NP_564586 Arabidopsis thaliana NP_564587 Arabidopsis thaliana NP_564628 Arabidopsis thaliana NP_564661 Arabidopsis thaliana NP_565318 Arabidopsis thaliana NP_565653 Arabidopsis thaliana NP_566553 Arabidopsis thaliana NP_566556 Arabidopsis thaliana NP_566558 Arabidopsis thaliana NP_566586 Arabidopsis thaliana NP_566622 Arabidopsis thaliana NP_566636 Arabidopsis thaliana NP_566684 Arabidopsis thaliana NP_567270 Arabidopsis thaliana NP_567289 Arabidopsis thaliana NP_568538 Arabidopsis thaliana NP_568542 Arabidopsis thaliana NP_683479 Arabidopsis thaliana NP_683524 Arabidopsis thaliana NP_683583 Arabidopsis thaliana NP_683587 Arabidopsis thaliana NP_850216 Arabidopsis thaliana NP_850602 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description ProSiteProfiles PS50181 11.0 6 52 IPR001810 F-box domain, cyclin-like SUPERFAMILY SSF81383 2.4E-17 6 80 IPR001810 F-box domain, cyclin-like PANTHER PTHR32133 4.1E-300 7 368 No hit NA Pfam PF00646 7.7E-8 9 53 IPR001810 F-box domain, cyclin-like SMART SM00256 1.0E-7 12 52 IPR001810 F-box domain, cyclin-like SUPERFAMILY SSF50965 1.0E-7 109 303 IPR011043 Galactose oxidase/kelch, beta-propeller SUPERFAMILY SSF81383 2.4E-17 110 143 IPR001810 F-box domain, cyclin-like TIGRFAM TIGR01640 6.1E-45 110 337 IPR017451 F-box associated interaction domain Pfam PF07734 2.4E-47 208 367 IPR006527 F-box associated domain, type 1