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About
Basic information
Locus name
AT2G13570
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:CCAAT-HAP3
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
cellular component
intracellular
molecular function
DNA binding
sequence-specific DNA binding
Sequence
AT2G13570.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_127594
Accession
Taxon
NP_001031500
Arabidopsis thaliana
NP_001031510
Arabidopsis thaliana
NP_001031511
Arabidopsis thaliana
NP_001031512
Arabidopsis thaliana
NP_030436
Arabidopsis thaliana
NP_178981
( AT2G13570 )
Arabidopsis thaliana
NP_190902
Arabidopsis thaliana
NP_193190
Arabidopsis thaliana
NP_199575
Arabidopsis thaliana
NP_850277
Arabidopsis thaliana
NP_850304
Arabidopsis thaliana
NP_850305
Arabidopsis thaliana
NP_973617
Arabidopsis thaliana
CMR350C
Cyanidioschyzon merolae strain 10D
111791
Chlamydomonas reinhardtii
ACO68590
Micromonas sp. RCC299
NP_001044719
Oryza sativa Japonica Group
NP_001050358
Oryza sativa Japonica Group
NP_001055775
Oryza sativa Japonica Group
NP_001056383
Oryza sativa Japonica Group
NP_001060230
Oryza sativa Japonica Group
gw1.02.00.531.1
Ostreococcus tauri
e_gw1.25.123.1
Physcomitrella patens subsp. patens
fgenesh1_pg.scaffold_302000018
Physcomitrella patens subsp. patens
gw1.25.124.1
Physcomitrella patens subsp. patens
gw1.462.21.1
Physcomitrella patens subsp. patens
27699.m000212
Ricinus communis
29719.m000316
Ricinus communis
29805.m001490
Ricinus communis
29923.m000817
Ricinus communis
29966.m000228
Ricinus communis
29992.m001420
Ricinus communis
gw1.20.164.1
Thalassiosira pseudonana CCMP1335
XP_002949581
Volvox carteri f. nagariensis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR11064
9.3E-117
3
215
No hit
NA
SUPERFAMILY
SSF47113
1.0E-41
37
166
IPR009072
Histone-fold
Pfam
PF00808
3.2E-28
40
104
IPR003958
Transcription factor CBF/NF-Y/archaeal histone
PRINTS
PR00615
2.3E-18
68
86
IPR003957
Transcription factor, CBFA/NFYB, DNA topoisomerase
ProSitePatterns
PS00685
NA
71
87
IPR003956
Transcription factor, NFYB/HAP3, conserved site
PRINTS
PR00615
2.3E-18
87
105
IPR003957
Transcription factor, CBFA/NFYB, DNA topoisomerase
PRINTS
PR00615
2.3E-18
106
124
IPR003957
Transcription factor, CBFA/NFYB, DNA topoisomerase
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787