Basic information
Locus name	AT2G26080
Alias	AtGLDP2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	Arabidopsis thaliana glycine decarboxylase P-protein 2 (AtGLDP2); FUNCTIONS IN: glycine dehydrogenase (decarboxylating) activity, ATP binding; INVOLVED IN: glycine decarboxylation via glycine cleavage system, glycine metabolic process; LOCATED IN: mitochondrion, glycine cleavage complex, chloroplast, chloroplast envelope.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process glycine catabolic process glycine metabolic process oxidation-reduction process molecular function glycine dehydrogenase (decarboxylating) activity
Pathway	KEGG map00260 (EC 1.4.4.2)
Sequence	AT2G26080.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127334	Accession Taxon NP_001119106 Arabidopsis thaliana NP_180178 ( AT2G26080 ) Arabidopsis thaliana NP_195027 Arabidopsis thaliana CMR282C Cyanidioschyzon merolae strain 10D 136984 Chlamydomonas reinhardtii ACO64735 Micromonas sp. RCC299 NP_001044046 Oryza sativa Japonica Group NP_001058062 Oryza sativa Japonica Group fgenesh1_pm.C_Chr_10.0001000067 Ostreococcus tauri estExt_Genewise1.C_150397 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_2760055 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_150394 Physcomitrella patens subsp. patens 29794.m003324 Ricinus communis estExt_gwp_gw1.C_chr_30089 Thalassiosira pseudonana CCMP1335 XP_002956892 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11773 0.0 71 1042 IPR020581 Glycine cleavage system P protein Hamap MF_00711 24.0 78 1036 IPR003437 Glycine cleavage system P protein, homodimeric Pfam PF02347 1.1E-198 86 514 IPR020580 Glycine cleavage system P-protein, N-terminal SUPERFAMILY SSF53383 3.7E-100 87 515 IPR015424 Pyridoxal phosphate-dependent transferase TIGRFAM TIGR00461 0.0 87 1029 IPR003437 Glycine cleavage system P protein, homodimeric Pfam PF02347 2.0E-14 527 807 IPR020580 Glycine cleavage system P-protein, N-terminal SUPERFAMILY SSF53383 1.6E-98 528 966 IPR015424 Pyridoxal phosphate-dependent transferase Coils Coil NA 704 725 No hit NA SUPERFAMILY SSF53383 1.6E-98 1009 1031 IPR015424 Pyridoxal phosphate-dependent transferase
Subcellular Localization
Localization	mitochondrion
Evidence	SUBAcon
Pubmed ID	23180787