Basic information
Locus name	AT3G01850
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative; FUNCTIONS IN: ribulose-phosphate 3-epimerase activity, catalytic activity; INVOLVED IN: carbohydrate metabolic process, metabolic process; LOCATED IN: endomembrane system
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process carbohydrate metabolic process pentose-phosphate shunt molecular function racemase and epimerase activity, acting on carbohydrates and derivatives ribulose-phosphate 3-epimerase activity
Sequence	AT3G01850.1 | Genomic | mRNA | CDS | Protein AT3G01850.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127027	Accession Taxon NP_176518 Arabidopsis thaliana NP_200949 Arabidopsis thaliana NP_566153 Arabidopsis thaliana NP_850495 ( AT3G01850 ) Arabidopsis thaliana NP_851240 Arabidopsis thaliana CMI084C Cyanidioschyzon merolae strain 10D CMO229C Cyanidioschyzon merolae strain 10D CMT633C Cyanidioschyzon merolae strain 10D 135614 Chlamydomonas reinhardtii 6964 Chlamydomonas reinhardtii ACO62093 Micromonas sp. RCC299 ACO63084 Micromonas sp. RCC299 NP_001049096 Oryza sativa Japonica Group NP_001063604 Oryza sativa Japonica Group e_gw1.06.00.341.1 Ostreococcus tauri e_gw1.06.00.372.1 Ostreococcus tauri e_gw1.11.00.284.1 Ostreococcus tauri e_gw1.2.623.1 Physcomitrella patens subsp. patens e_gw1.39.184.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_380111 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_30234 Physcomitrella patens subsp. patens 27960.m000033 Ricinus communis 30138.m004049 Ricinus communis 30190.m010953 Ricinus communis e_gw1.3.559.1 Thalassiosira pseudonana CCMP1335 fgenesh1_pg.C_chr_7000186 Thalassiosira pseudonana CCMP1335 XP_002955598 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11749 3.7E-137 1 222 IPR000056 Ribulose-phosphate 3-epimerase-like PIRSF PIRSF001461 3.4E-104 1 225 IPR026019 Ribulose-phosphate 3-epimerase SUPERFAMILY SSF51366 2.5E-66 2 217 IPR011060 Ribulose-phosphate binding barrel Pfam PF00834 4.6E-71 5 204 IPR000056 Ribulose-phosphate 3-epimerase-like TIGRFAM TIGR01163 1.4E-70 5 215 IPR000056 Ribulose-phosphate 3-epimerase-like ProSitePatterns PS01085 NA 33 47 IPR000056 Ribulose-phosphate 3-epimerase-like ProSitePatterns PS01086 NA 139 161 IPR000056 Ribulose-phosphate 3-epimerase-like