Basic information
Locus name	AT2G47970
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	NPL4 family protein; FUNCTIONS IN: molecular_function unknown
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT2G47970.1 | Genomic | mRNA | CDS | Protein AT2G47970.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128565	Accession Taxon NP_191859 Arabidopsis thaliana NP_566118 ( AT2G47970 ) Arabidopsis thaliana NP_973714 Arabidopsis thaliana 153915 Chlamydomonas reinhardtii NP_001043084 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_600169 Physcomitrella patens subsp. patens 29647.m002046 Ricinus communis fgenesh1_pg.C_chr_2000364 Thalassiosira pseudonana CCMP1335
Cross Link
Database Entry ID E-value Start End InterPro ID Description Pfam PF11543 9.5E-7 2 85 IPR024682 Nuclear pore localisation protein Npl4, ubiquitin-like domain SUPERFAMILY SSF54236 1.8E-20 2 92 No hit NA PANTHER PTHR12710 1.2E-112 79 329 No hit NA Pfam PF05021 4.8E-37 156 331 IPR007717 Nuclear pore localisation protein NPL4
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787