Basic information
Locus name	AT2G47790
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:transducin family protein
Effect for Senescence	unclear
Gene Description	transducin family protein / WD-40 repeat family protein; FUNCTIONS IN: nucleotide binding
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT2G47790.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129888	Accession Taxon NP_566111 ( AT2G47790 ) Arabidopsis thaliana ACO61888 Micromonas sp. RCC299 NP_001066611 Oryza sativa Japonica Group 0300010019 Ostreococcus tauri e_gw1.11.106.1 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_110176 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_1190006 Physcomitrella patens subsp. patens 29986.m001593 Ricinus communis fgenesh1_pg.C_chr_3000226 Thalassiosira pseudonana CCMP1335 XP_002946690 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22889 1.1E-128 19 392 No hit NA SUPERFAMILY SSF50978 6.2E-30 41 258 IPR017986 WD40-repeat-containing domain SMART SM00320 1.3E-5 72 115 IPR001680 WD40 repeat Pfam PF00400 4.5E-8 77 115 IPR001680 WD40 repeat ProSiteProfiles PS50082 11.6 79 124 IPR001680 WD40 repeat ProSiteProfiles PS50294 18.5 79 211 IPR017986 WD40-repeat-containing domain SMART SM00320 27.0 118 158 IPR001680 WD40 repeat SMART SM00320 1.1E-4 161 202 IPR001680 WD40 repeat Pfam PF00400 0.0 171 202 IPR001680 WD40 repeat SUPERFAMILY SSF50978 6.2E-30 293 359 IPR017986 WD40-repeat-containing domain SMART SM00320 290.0 313 359 IPR001680 WD40 repeat