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Locus name | AT5G45710 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Transcription regulation:HSF |
Effect for Senescence | Unclear |
Gene Description | Upregulated in senescent leaves |
Evidence | Molecular evidence:Real-Time PCR [Ref 1] |
References | 1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber BTranscription factors regulating leaf senescence in Arabidopsis thaliana.Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75 |
Sequence | AT5G45710.1 | Genomic | mRNA | CDS | Protein AT5G45710.2 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT5G45710.1 miRNA: ath-miR831 miRNA: ath-miR831 mfe: -24.7 kcal/mol p-value: 0.023608
position: 691 target 5' A C C G 3' AAGA GGAG AUGGAG GAUCA UUCU UCUC UGCUUC CUAGU miRNA 3' G A U 5'
target: AT5G45710.2 miRNA: ath-miR831 miRNA: ath-miR831 mfe: -24.7 kcal/mol p-value: 0.024713
position: 765 target 5' A C C G 3' AAGA GGAG AUGGAG GAUCA UUCU UCUC UGCUUC CUAGU miRNA 3' G A U 5'
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Ortholog Group | |
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Ortholog Groups: OG5_176104 | |
Cross Link | |
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Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR10015 | 3.7E-17 | 1 | 112 | No hit | NA | Coils | Coil | NA | 22 | 78 | No hit | NA |
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Mutant Image | |
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Localization | nucleus |
Evidence | SUBAcon |
Pubmed ID | 23180787 |