Basic information
Locus name	AT2G46970
Alias	PIL1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	PHYTOCHROME INTERACTING FACTOR 3-LIKE 1 (PIL1); FUNCTIONS IN: transcription factor activity; INVOLVED IN: red or far red light signaling pathway, shade avoidance, regulation of transcription; LOCATED IN: nucleus
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein dimerization activity
Sequence	AT2G46970.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_189566	Accession Taxon NP_001078329 Arabidopsis thaliana NP_182220 ( AT2G46970 ) Arabidopsis thaliana NP_191768 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description Coils Coil NA 101 122 No hit NA PANTHER PTHR12565 1.2E-32 188 415 No hit NA SUPERFAMILY SSF47459 1.8E-17 227 304 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain ProSiteProfiles PS50888 15.3 229 278 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain Pfam PF00010 8.2E-10 233 279 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain SMART SM00353 6.5E-11 235 284 IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787