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About
Basic information
Locus name
AT4G00480
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:HLH
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
molecular function
protein dimerization activity
Sequence
AT4G00480.1 |
Genomic
|
mRNA
|
CDS
|
Protein
AT4G00480.2 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_211792
Accession
Taxon
NP_001154194
( AT4G00480 )
Arabidopsis thaliana
NP_191957
Arabidopsis thaliana
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR11514
8.3E-61
23
235
No hit
NA
Pfam
PF14215
1.2E-50
23
216
IPR025610
Transcription factor MYC/MYB N-terminal
ProSiteProfiles
PS50888
11.3
333
382
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
SMART
SM00353
2.9E-8
339
388
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
SUPERFAMILY
SSF47459
1.0E-8
346
397
IPR011598
Myc-type, basic helix-loop-helix (bHLH) domain
Coils
Coil
NA
372
393
No hit
NA
Mutant Image
normal leaf senescence
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787