Basic information
Locus name	AT2G45160
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:scarecrow transcription factor
Effect for Senescence	unclear
Gene Description	scarecrow transcription factor family protein; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT2G45160.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G45160.1  miRNA: ath-miR170 miRNA: ath-miR170 mfe: -39.5 kcal/mol  p-value: 0.000014  position: 1001  target 5' G                     C  3'             GAUAUUGGCGCGGCUCAAUCA                 CUAUAACUGUGCCGAGUUAGU      miRNA  3'                          5'  target: AT2G45160.1  miRNA: ath-miR171a miRNA: ath-miR171a mfe: -44.1 kcal/mol  p-value: 0.000009  position: 1001  target 5' G                     C  3'             GAUAUUGGCGCGGCUCAAUCA                 CUAUAACCGCGCCGAGUUAGU      miRNA  3'                          5'
Ortholog Group
Ortholog Groups: OG5_212311	Accession Taxon NP_182041 ( AT2G45160 ) Arabidopsis thaliana NP_191622 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR31523 1.5E-229 2 640 No hit NA ProSiteProfiles PS50985 41.3 243 619 IPR005202 Transcription factor GRAS Pfam PF03514 1.2E-91 269 639 IPR005202 Transcription factor GRAS
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787