Basic information
Locus name	AT2G43410
Alias	FPA
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others(embryonic development)
Effect for Senescence	unclear
Gene Description	FPA; FUNCTIONS IN: RNA binding; INVOLVED IN: embryonic development, positive regulation of flower development, embryo sac development, chromatin silencing by small RNA, vegetative to reproductive phase transition
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function nucleic acid binding
Sequence	AT2G43410.1 | Genomic | mRNA | CDS | Protein AT2G43410.2 | Genomic | mRNA | CDS | Protein AT2G43410.3 | Genomic | mRNA | CDS | Protein AT2G43410.4 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT2G43410.1  miRNA: ath-miR863-3p miRNA: ath-miR863-3p mfe: -27.7 kcal/mol  p-value: 0.002959  position: 3066  target 5' A                    U  3'             GUUGU UCUUGUUGUUCUCA                 UAAUA AGAACAACGAGAGU      miRNA  3'       C              U  5'  target: AT2G43410.2  miRNA: ath-miR863-3p miRNA: ath-miR863-3p mfe: -27.7 kcal/mol  p-value: 0.003083  position: 3195  target 5' A                    U  3'             GUUGU UCUUGUUGUUCUCA                 UAAUA AGAACAACGAGAGU      miRNA  3'       C              U  5'
Ortholog Group
Ortholog Groups: OG5_160037	Accession Taxon NP_001078046 Arabidopsis thaliana NP_001078047 Arabidopsis thaliana NP_001078048 ( AT2G43410 ) Arabidopsis thaliana NP_181869 Arabidopsis thaliana NP_001063671 Oryza sativa Japonica Group estExt_fgenesh1_pg.C_310150 Physcomitrella patens subsp. patens 29577.m000447 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23189 0.0 9 831 No hit NA SUPERFAMILY SSF54928 1.8E-22 12 92 No hit NA ProSiteProfiles PS50102 17.5 18 90 IPR000504 RNA recognition motif domain SMART SM00360 4.8E-19 19 86 IPR000504 RNA recognition motif domain Pfam PF00076 9.1E-16 20 84 IPR000504 RNA recognition motif domain SUPERFAMILY SSF54928 1.1E-21 92 187 No hit NA ProSiteProfiles PS50102 15.0 95 166 IPR000504 RNA recognition motif domain SMART SM00360 5.4E-17 96 162 IPR000504 RNA recognition motif domain Pfam PF00076 8.0E-12 97 159 IPR000504 RNA recognition motif domain SUPERFAMILY SSF54928 9.9E-13 198 281 No hit NA ProSiteProfiles PS50102 10.1 206 281 IPR000504 RNA recognition motif domain SMART SM00360 2.5E-4 207 277 IPR000504 RNA recognition motif domain Pfam PF13893 3.9E-11 225 279 No hit NA Pfam PF07744 2.2E-8 441 537 IPR012921 Spen paralogue and orthologue SPOC, C-terminal
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787