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Locus name | AT2G37520 |
Organism | Arabidopsis thaliana | Taxonomic identifier | [NCBI] | Function category | Transcription regulation:PHD | Effect for Senescence | unclear | Gene Description | PHD finger family protein; FUNCTIONS IN: protein binding, DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependen | Evidence | Genomic evidence:microarray data [Ref 1] | References | 1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-WollastonHigh-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.Plant Cell 2011 Mar;23(3):873-94 | Gene Ontology | | Sequence | AT2G37520.1 | Genomic | mRNA | CDS | Protein
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| Database | Entry ID | E-value | Start | End | InterPro ID | Description | PANTHER | PTHR13711 | 7.2E-17 | 431 | 517 | No hit | NA | SUPERFAMILY | SSF57903 | 9.9E-15 | 465 | 513 | IPR011011 | Zinc finger, FYVE/PHD-type | ProSiteProfiles | PS50016 | 10.0 | 468 | 513 | IPR019787 | Zinc finger, PHD-finger | Pfam | PF00628 | 5.2E-10 | 470 | 511 | IPR019787 | Zinc finger, PHD-finger | SMART | SM00249 | 4.5E-12 | 470 | 511 | IPR001965 | Zinc finger, PHD-type | ProSitePatterns | PS01359 | NA | 471 | 510 | IPR019786 | Zinc finger, PHD-type, conserved site | SUPERFAMILY | SSF57903 | 7.2E-8 | 519 | 603 | IPR011011 | Zinc finger, FYVE/PHD-type | SMART | SM00249 | 4.5E-5 | 549 | 606 | IPR001965 | Zinc finger, PHD-type | ProSitePatterns | PS01359 | NA | 550 | 605 | IPR019786 | Zinc finger, PHD-type, conserved site | SUPERFAMILY | SSF55729 | 7.3E-9 | 698 | 792 | IPR016181 | Acyl-CoA N-acyltransferase |
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