Leaf Senescence DataBase

Basic information

Locus name

AT2G40140

Alias

CZF1

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Transcription regulation

Effect for Senescence

unclear

Gene Description

CZF1; FUNCTIONS IN: transcription factor activity; INVOLVED IN: defense response to fungus, response to cold, response to chitin, regulation of transcription

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

molecular function

Sequence

Ortholog Group

Ortholog Groups: OG5_189488

Accession	Taxon
NP_001031517	Arabidopsis thaliana
NP_181543 ( AT2G40140 )	Arabidopsis thaliana
NP_567030	Arabidopsis thaliana

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR14493	0.0	6	596	No hit	NA
SUPERFAMILY	SSF48403	4.8E-14	27	157	IPR020683	Ankyrin repeat-containing domain
ProSiteProfiles	PS50297	13.7	76	157	IPR020683	Ankyrin repeat-containing domain
SMART	SM00248	8.3E-4	76	106	IPR002110	Ankyrin repeat
Pfam	PF13637	1.9E-9	78	129	No hit	NA
SMART	SM00248	4.0	111	143	IPR002110	Ankyrin repeat
ProSiteProfiles	PS50103	14.0	254	281	IPR000571	Zinc finger, CCCH-type
SMART	SM00356	6.3E-5	254	280	IPR000571	Zinc finger, CCCH-type
Pfam	PF00642	1.4E-5	258	279	IPR000571	Zinc finger, CCCH-type
ProSiteProfiles	PS50103	6.5	289	313	IPR000571	Zinc finger, CCCH-type
SMART	SM00356	37.0	289	312	IPR000571	Zinc finger, CCCH-type

Mutant Image

SALK_024800C.This mutant exhibited normal leaf senescence.

Subcellular Localization

Localization

nucleus

Evidence

SUBAcon

Pubmed ID

23180787