Basic information
Locus name	AT2G40810
Alias	AtATG18c
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Nutrient recycling(autophagy)
Effect for Senescence	unclear
Gene Description	Homolog of yeast autophagy 18C (ATG18C)
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT2G40810.1 | Genomic | mRNA | CDS | Protein AT2G40810.2 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128185	Accession Taxon NP_001030918 Arabidopsis thaliana NP_181613 Arabidopsis thaliana NP_191203 Arabidopsis thaliana NP_567132 Arabidopsis thaliana NP_973650 ( AT2G40810 ) Arabidopsis thaliana ACO61635 Micromonas sp. RCC299 NP_001042130 Oryza sativa Japonica Group NP_001045307 Oryza sativa Japonica Group e_gw1.06.00.207.1 Ostreococcus tauri e_gw1.26.59.1 Physcomitrella patens subsp. patens e_gw1.41.57.1 Physcomitrella patens subsp. patens fgenesh1_pm.scaffold_53000009 Physcomitrella patens subsp. patens 29729.m002396 Ricinus communis 30129.m000356 Ricinus communis e_gw1.17.79.1 Thalassiosira pseudonana CCMP1335 XP_002955876 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11227 1.7E-217 4 392 No hit NA SMART SM00320 64.0 18 56 IPR001680 WD40 repeat SUPERFAMILY SSF50978 1.5E-32 32 277 IPR017986 WD40-repeat-containing domain SMART SM00320 0.0 190 230 IPR001680 WD40 repeat Pfam PF00400 0.1 194 225 IPR001680 WD40 repeat SMART SM00320 0.3 233 274 IPR001680 WD40 repeat Pfam PF00400 0.0 248 274 IPR001680 WD40 repeat