Basic information
Locus name	AT2G41540
Alias	GPDHC1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:ABA
Effect for Senescence	unclear
Gene Description	GPDHC1; FUNCTIONS IN: glycerol-3-phosphate dehydrogenase (NAD+) activity, NAD or NADH binding; INVOLVED IN: response to salt stress, response to flooding, response to water deprivation, glycerol-3-phosphate metabolic process, response to abscisic acid stimulus
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process glycerol-3-phosphate metabolic process oxidation-reduction process cellular component glycerol-3-phosphate dehydrogenase complex molecular function glycerol-3-phosphate dehydrogenase [NAD+] activity
Pathway	KEGG map00564 (EC 1.1.1.94) MetaCyc PWY-5667
Sequence	AT2G41540.1 | Genomic | mRNA | CDS | Protein AT2G41540.2 | Genomic | mRNA | CDS | Protein AT2G41540.3 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_144401	Accession Taxon NP_001031525 Arabidopsis thaliana NP_181685 Arabidopsis thaliana NP_187426 Arabidopsis thaliana NP_850352 ( AT2G41540 ) Arabidopsis thaliana NP_001044541 Oryza sativa Japonica Group NP_001045350 Oryza sativa Japonica Group NP_001055933 Oryza sativa Japonica Group e_gw1.114.195.1 Physcomitrella patens subsp. patens e_gw1.323.42.1 Physcomitrella patens subsp. patens 29344.m000105 Ricinus communis 30131.m007256 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11728 4.5E-118 16 462 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent SUPERFAMILY SSF51735 9.0E-16 42 101 No hit NA PRINTS PR00077 6.7E-7 46 63 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent SUPERFAMILY SSF51735 9.0E-16 144 274 No hit NA Pfam PF01210 3.2E-10 145 246 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal PRINTS PR00077 6.7E-7 267 291 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent Pfam PF07479 9.4E-40 273 431 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal SUPERFAMILY SSF48179 2.6E-22 274 429 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787