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About
Basic information
Locus name
AT5G11590
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Transcription regulation:AP2-EREBP
Effect for Senescence
Unclear
Gene Description
Upregulated in senescent leaves
Evidence
Molecular evidence:Real-Time PCR [Ref 1]
References
1: Balazadeh S, Ria_o-Pachon DM, Mueller-Roeber B
Transcription factors regulating leaf senescence in Arabidopsis thaliana.
Plant Biol (Stuttg) 2008 Sep;10 Suppl 1:63-75
Gene Ontology
biological process
regulation of transcription, DNA-dependent
molecular function
sequence-specific DNA binding transcription factor activity
Sequence
AT5G11590.1 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_170402
Accession
Taxon
NP_196720
( AT5G11590 )
Arabidopsis thaliana
NP_197953
Arabidopsis thaliana
29794.m003381
Ricinus communis
29912.m005463
Ricinus communis
30146.m003535
Ricinus communis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
PANTHER
PTHR31985
4.9E-98
1
236
No hit
NA
Pfam
PF00847
7.9E-16
49
99
IPR001471
AP2/ERF domain
ProSiteProfiles
PS51032
23.4
50
107
IPR001471
AP2/ERF domain
SMART
SM00380
2.3E-35
50
113
IPR001471
AP2/ERF domain
SUPERFAMILY
SSF54171
1.6E-21
50
108
IPR016177
DNA-binding, integrase-type
PRINTS
PR00367
2.4E-10
51
62
IPR001471
AP2/ERF domain
PRINTS
PR00367
2.4E-10
73
89
IPR001471
AP2/ERF domain
Subcellular Localization
Localization
nucleus
Evidence
SUBAcon
Pubmed ID
23180787