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About
Basic information
Locus name
AT3G06190
Alias
BPM2
Organism
Arabidopsis thaliana
Taxonomic identifier
[NCBI]
Function category
Others
Effect for Senescence
unclear
Gene Description
BTB-POZ AND MATH DOMAIN 2 (BPM2); FUNCTIONS IN: protein binding
Evidence
Genomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94
Gene Ontology
molecular function
protein binding
Sequence
AT3G06190.1 |
Genomic
|
mRNA
|
CDS
|
Protein
AT3G06190.2 |
Genomic
|
mRNA
|
CDS
|
Protein
Ortholog Group
Ortholog Groups:
OG5_128326
Accession
Taxon
NP_001031516
Arabidopsis thaliana
NP_030522
Arabidopsis thaliana
NP_197401
Arabidopsis thaliana
NP_566275
( AT3G06190 )
Arabidopsis thaliana
175298
Chlamydomonas reinhardtii
ACO66635
Micromonas sp. RCC299
NP_001058677
Oryza sativa Japonica Group
NP_001060495
Oryza sativa Japonica Group
NP_001061285
Oryza sativa Japonica Group
NP_001061287
Oryza sativa Japonica Group
NP_001061288
Oryza sativa Japonica Group
NP_001061289
Oryza sativa Japonica Group
NP_001064635
Oryza sativa Japonica Group
NP_001064636
Oryza sativa Japonica Group
NP_001064637
Oryza sativa Japonica Group
NP_001064638
Oryza sativa Japonica Group
NP_001064640
Oryza sativa Japonica Group
NP_001064641
Oryza sativa Japonica Group
NP_001064642
Oryza sativa Japonica Group
NP_001064643
Oryza sativa Japonica Group
NP_001064644
Oryza sativa Japonica Group
NP_001064646
Oryza sativa Japonica Group
NP_001064648
Oryza sativa Japonica Group
NP_001064649
Oryza sativa Japonica Group
NP_001064650
Oryza sativa Japonica Group
NP_001064654
Oryza sativa Japonica Group
NP_001064655
Oryza sativa Japonica Group
NP_001064656
Oryza sativa Japonica Group
NP_001064657
Oryza sativa Japonica Group
NP_001064671
Oryza sativa Japonica Group
NP_001068302
Oryza sativa Japonica Group
gw1.14.00.143.1
Ostreococcus tauri
e_gw1.205.34.1
Physcomitrella patens subsp. patens
estExt_Genewise1.C_1480036
Physcomitrella patens subsp. patens
estExt_Genewise1.C_3490001
Physcomitrella patens subsp. patens
29703.m001550
Ricinus communis
29726.m003917
Ricinus communis
30072.m000949
Ricinus communis
30143.m001182
Ricinus communis
XP_002954685
Volvox carteri f. nagariensis
Cross Link
Database
Entry ID
E-value
Start
End
InterPro ID
Description
SUPERFAMILY
SSF49599
1.4E-35
29
168
IPR008974
TRAF-like
ProSiteProfiles
PS50144
22.7
32
166
IPR002083
MATH
SMART
SM00061
6.4E-11
37
149
IPR002083
MATH
Pfam
PF00917
2.5E-6
51
166
IPR002083
MATH
SUPERFAMILY
SSF54695
1.1E-30
178
309
IPR011333
BTB/POZ fold
Pfam
PF00651
1.0E-24
193
309
IPR013069
BTB/POZ
ProSiteProfiles
PS50097
17.0
202
269
IPR000210
BTB/POZ-like
SMART
SM00225
3.2E-24
202
311
IPR000210
BTB/POZ-like
PANTHER
PTHR26379
7.6E-42
203
369
No hit
NA
Subcellular Localization
Localization
cytosol
Evidence
SUBAcon
Pubmed ID
23180787