Basic information
Locus name	AT5G02810
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:ABA
Effect for Senescence	Unclear
Gene Description	ABI3-interacting protein. Upregulated in senescent leaves.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process phosphorelay signal transduction system regulation of transcription, DNA-dependent molecular function phosphorelay response regulator activity protein binding
Pathway	Reactome REACT_14797
Sequence	AT5G02810.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G02810.1  miRNA: ath-miR838 miRNA: ath-miR838 mfe: -22.7 kcal/mol  p-value: 0.072617  position:  2218  target 5' A   G   U     C     C 3'             GUG AAG GGUAG GGAAA              CAC UUC UCAUC UCUUU   miRNA  3' A   G   U     U     U 5'
Ortholog Group
Ortholog Groups: OG5_139246	Accession Taxon NP_568107 ( AT5G02810 ) Arabidopsis thaliana NP_568919 Arabidopsis thaliana 166515 Chlamydomonas reinhardtii NP_001049760 Oryza sativa Japonica Group NP_001060743 Oryza sativa Japonica Group e_gw1.10.00.418.1 Ostreococcus tauri estExt_fgenesh1_pg.C_4120020 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_810069 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_810075 Physcomitrella patens subsp. patens fgenesh1_pg.scaffold_412000021 Physcomitrella patens subsp. patens 29758.m000642 Ricinus communis 29805.m001503 Ricinus communis 30130.m000280 Ricinus communis XP_002958700 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description SUPERFAMILY SSF52172 1.9E-31 77 203 IPR011006 CheY-like superfamily PANTHER PTHR26402 9.0E-34 78 239 No hit NA SMART SM00448 3.1E-25 78 193 IPR001789 Signal transduction response regulator, receiver domain ProSiteProfiles PS50110 28.5 79 197 IPR001789 Signal transduction response regulator, receiver domain Pfam PF00072 6.0E-19 80 189 IPR001789 Signal transduction response regulator, receiver domain Pfam PF06203 1.3E-17 669 712 IPR010402 CCT domain ProSiteProfiles PS51017 15.7 669 711 IPR010402 CCT domain
Subcellular Localization
Localization 1 Localization mitochondria Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787