Leaf Senescence DataBase

Basic information

Locus name

AT3G07550

Alias

FBL12

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Protein degradation/modification:ubiquitin

Effect for Senescence

unclear

Gene Description

F-box family protein (FBL12); FUNCTIONS IN: ubiquitin-protein ligase activity; INVOLVED IN: ubiquitin-dependent protein catabolic process

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

molecular function

Sequence

Ortholog Group

Ortholog Groups: OG5_178271

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR23125	6.2E-242	1	385	No hit	NA
SUPERFAMILY	SSF81383	9.6E-6	11	50	IPR001810	F-box domain, cyclin-like
SUPERFAMILY	SSF52047	2.0E-38	80	213	No hit	NA
SMART	SM00367	19.0	116	141	IPR006553	Leucine-rich repeat, cysteine-containing subtype
Pfam	PF13516	0.0	142	164	No hit	NA
SMART	SM00367	0.5	142	166	IPR006553	Leucine-rich repeat, cysteine-containing subtype
SMART	SM00367	8.6	167	192	IPR006553	Leucine-rich repeat, cysteine-containing subtype
Pfam	PF13516	0.4	169	191	No hit	NA
SMART	SM00367	64.0	193	218	IPR006553	Leucine-rich repeat, cysteine-containing subtype
SUPERFAMILY	SSF52047	2.0E-38	262	368	No hit	NA
SMART	SM00367	0.1	268	293	IPR006553	Leucine-rich repeat, cysteine-containing subtype
Pfam	PF13516	1.3	269	292	No hit	NA
Pfam	PF13516	0.6	320	342	No hit	NA
SMART	SM00367	30.0	320	345	IPR006553	Leucine-rich repeat, cysteine-containing subtype