Basic information
Locus name	AT2G36270
Alias	ABI5/BZIP39/DPBF1/GIA1/NEM1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:ABA
Effect for Senescence	promote
Gene Description	Abscisic acid insensitive 5 (ABI5).Upregulated in senescent leaves.Encodes a member of the basic leucine zipper transcription factor family, involved in ABA signalling during seed maturation and germination.The abi5-1 mutant did exhibit a delay in senescence compared to its wild type grown on medium containing glucose in combination with low, but not in combination with high nitrogen supply.
Evidence	Genetic evidence: mutant [Ref 1, Ref 2]; Genomic evidence:microarray data [Ref 3]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85 2: Pourtau N, Mar��s M, Purdy S, Quentin N, Ru_l A, Wingler A Interactions of abscisic acid and sugar signalling in the regulation of leaf senescence. Planta 2004 Sep;219(5):765-72 3: Stone SL, Williams LA, Farmer LM, Vierstra RD, Callis J KEEP ON GOING, a RING E3 ligase essential for Arabidopsis growth and development, is involved in abscisic acid signaling. Plant Cell 2006 Dec;18(12):3415-28
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT2G36270.1 | Genomic | mRNA | CDS | Protein
Mutant information
Mutant name	abi5-1
Mutant/Transgenic	mutant
Ecotype	Ws
Mutagenesis type	T-DNA insertion_knock out
miRNA Interaction
Details	target: AT2G36270.1  miRNA: ath-miR396a miRNA: ath-miR396a mfe: -25.8 kcal/mol  p-value: 0.013734  position:  1223  target 5' C     G        A      A 3'             CAG U GAGAAAGU GUGGAG              GUC A UUCUUUCG CACCUU   miRNA  3'     A G        A        5'
Ortholog Group
Ortholog Groups: OG5_213108	Accession Taxon NP_565840 ( AT2G36270 ) Arabidopsis thaliana 29625.m000702 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22952 1.5E-220 7 440 No hit NA SMART SM00338 4.8E-16 353 417 IPR004827 Basic-leucine zipper domain ProSiteProfiles PS50217 11.7 355 407 IPR004827 Basic-leucine zipper domain Pfam PF00170 9.6E-13 357 405 IPR004827 Basic-leucine zipper domain SUPERFAMILY SSF57959 5.6E-11 357 406 No hit NA ProSitePatterns PS00036 NA 360 375 IPR004827 Basic-leucine zipper domain Coils Coil NA 373 415 No hit NA
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787