Basic information
Locus name	AT3G08850
Alias	RAPTOR1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:protein binding
Effect for Senescence	unclear
Gene Description	RAPTOR1; FUNCTIONS IN: protein binding, nucleotide binding; INVOLVED IN: embryonic development ending in seed dormancy, cell growth; LOCATED IN: CUL4 RING ubiquitin ligase complex
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process TOR signaling cascade cellular component TORC1 complex
Sequence	AT3G08850.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_128380	Accession Taxon NP_195797 Arabidopsis thaliana NP_566335 ( AT3G08850 ) Arabidopsis thaliana CMH109C Cyanidioschyzon merolae strain 10D 107651 Chlamydomonas reinhardtii ACO63090 Micromonas sp. RCC299 NP_001065961 Oryza sativa Japonica Group e_gw1.06.00.19.1 Ostreococcus tauri e_gw1.26.186.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_880175 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_1240088 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1990063 Physcomitrella patens subsp. patens 29718.m000133 Ricinus communis 30015.m000214 Ricinus communis estExt_fgenesh1_pg.C_chr_130246 Thalassiosira pseudonana CCMP1335 XP_002947301 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR12848 0.0 67 1344 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 102 123 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 146 165 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 167 188 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 193 218 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 220 244 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 291 311 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 329 356 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 364 388 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 440 470 IPR004083 Regulatory associated protein of TOR SUPERFAMILY SSF48371 5.4E-35 456 721 IPR016024 Armadillo-type fold PRINTS PR01547 1.1E-165 471 492 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 494 513 IPR004083 Regulatory associated protein of TOR PRINTS PR01547 1.1E-165 518 534 IPR004083 Regulatory associated protein of TOR Pfam PF13646 1.0E-6 642 724 No hit NA SUPERFAMILY SSF48371 5.4E-35 823 864 IPR016024 Armadillo-type fold SMART SM00320 81.0 1015 1055 IPR001680 WD40 repeat ProSiteProfiles PS50294 19.2 1023 1344 IPR017986 WD40-repeat-containing domain SUPERFAMILY SSF50978 7.1E-40 1032 1338 IPR017986 WD40-repeat-containing domain SMART SM00320 3.0 1058 1102 IPR001680 WD40 repeat Pfam PF00400 0.1 1086 1102 IPR001680 WD40 repeat SMART SM00320 370.0 1109 1155 IPR001680 WD40 repeat SMART SM00320 0.8 1158 1199 IPR001680 WD40 repeat PRINTS PR01547 1.1E-165 1183 1201 IPR004083 Regulatory associated protein of TOR SMART SM00320 290.0 1203 1246 IPR001680 WD40 repeat SMART SM00320 0.0 1250 1289 IPR001680 WD40 repeat Pfam PF00400 0.0 1256 1289 IPR001680 WD40 repeat SMART SM00320 12.0 1302 1337 IPR001680 WD40 repeat
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787