Basic information
Locus name	AT3G10690
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:DNA gyrase
Effect for Senescence	unclear
Gene Description	DNA gyrase subunit A family protein; FUNCTIONS IN: DNA topoisomerase activity, DNA topoisomerase (ATP-hydrolyzing) activity, DNA binding, catalytic activity, ATP binding; INVOLVED IN: DNA topological change, DNA metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleoid
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	biological process DNA topological change molecular function ATP binding DNA binding DNA topoisomerase activity DNA topoisomerase type II (ATP-hydrolyzing) activity
Sequence	AT3G10690.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_129568	Accession Taxon NP_187680 ( AT3G10690 ) Arabidopsis thaliana CMS243C Cyanidioschyzon merolae strain 10D 115934 Chlamydomonas reinhardtii NP_113263 Guillardia theta ACO67159 Micromonas sp. RCC299 NP_001051677 Oryza sativa Japonica Group 0000020003 Ostreococcus tauri gw1.17.00.23.1 Ostreococcus tauri e_gw1.122.9.1 Physcomitrella patens subsp. patens 29743.m000296 Ricinus communis 29743.m000297 Ricinus communis estExt_gwp_gw1.C_chr_30186 Thalassiosira pseudonana CCMP1335 XP_002951147 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10169 1.6E-260 44 748 No hit NA TIGRFAM TIGR01063 0.0 101 927 IPR005743 DNA gyrase, subunit A SMART SM00434 4.7E-239 104 560 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal SUPERFAMILY SSF56719 2.1E-165 124 580 IPR013760 DNA topoisomerase, type IIA-like domain Pfam PF00521 1.8E-152 125 559 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal Coils Coil NA 513 553 No hit NA SUPERFAMILY SSF101904 1.3E-81 596 941 No hit NA Pfam PF03989 1.3E-6 601 646 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Pfam PF03989 2.3E-6 650 699 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Pfam PF03989 0.0 706 749 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Pfam PF03989 2.1E-8 756 799 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Pfam PF03989 1.2E-6 826 870 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel Pfam PF03989 1.8E-6 883 927 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel
Subcellular Localization
Localization 1 Localization mitochondria Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization plastid Evidence SUBAcon Pubmed ID 23180787