Basic information
Locus name	AT4G34000
Alias	ABF3
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:ABA
Effect for Senescence	promote
Gene Description	Encodes an ABA-responsive element-binding protein with similarity to transcription factors that is expressed in response to stress and abscisic acid.
Evidence	Genetic evidence [Ref 1]
References	1: Gao S, Gao J, Zhu X, Song Y, Li Z, Ren G, Zhou X, Kuai B. ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis. Mol Plant. 2016 Sep 6;9(9):1272-1285. doi: 10.1016/j.molp.2016.06.006. Epub 2016 Jun 30.
Gene Ontology	biological process regulation of transcription, DNA-dependent molecular function sequence-specific DNA binding transcription factor activity sequence-specific DNA binding
Sequence	AT4G34000.1 | Genomic | mRNA | CDS | Protein AT4G34000.2 | Genomic | mRNA | CDS | Protein AT4G34000.3 | Genomic | mRNA | CDS | Protein
Mutant information
Mutant name	abf2abf3abf4
Mutant/Transgenic	mutant
Ecotype	Col-0
Mutagenesis type	cross
miRNA Interaction
Details	target: AT4G34000.1  miRNA: ath-miR776 miRNA: ath-miR776 mfe: -23.5 kcal/mol  p-value: 0.028093  position:  951  target 5' U    G         U      A 3'             GGCA UAAUGGAGG CUUGGG              UUGU GUUAUCUUC GAAUCU   miRNA  3'      A         U        5'  target: AT4G34000.1  miRNA: ath-miR778 miRNA: ath-miR778 mfe: -25.7 kcal/mol  p-value: 0.015555  position:  371  target 5' A       A      A C     A 3'             UGGUGUG GUGAGC G AGCCA              GCCACAU UAUUUG U UCGGU   miRNA  3'         G      G         5'  target: AT4G34000.2  miRNA: ath-miR776 miRNA: ath-miR776 mfe: -23.5 kcal/mol  p-value: 0.023679  position:  703  target 5' U    G         U      A 3'             GGCA UAAUGGAGG CUUGGG              UUGU GUUAUCUUC GAAUCU   miRNA  3'      A         U        5'  target: AT4G34000.2  miRNA: ath-miR778 miRNA: ath-miR778 mfe: -25.7 kcal/mol  p-value: 0.012759  position:  123  target 5' A       A      A C     A 3'             UGGUGUG GUGAGC G AGCCA              GCCACAU UAUUUG U UCGGU   miRNA  3'         G      G         5'  target: AT4G34000.3  miRNA: ath-miR776 miRNA: ath-miR776 mfe: -23.5 kcal/mol  p-value: 0.025063  position:  702  target 5' U    G         U      A 3'             GGCA UAAUGGAGG CUUGGG              UUGU GUUAUCUUC GAAUCU   miRNA  3'      A         U        5'  target: AT4G34000.3  miRNA: ath-miR778 miRNA: ath-miR778 mfe: -25.7 kcal/mol  p-value: 0.013627  position:  122  target 5' A       A      A C     A 3'             UGGUGUG GUGAGC G AGCCA              GCCACAU UAUUUG U UCGGU   miRNA  3'         G      G         5'
Ortholog Group
Ortholog Groups: OG5_189502	Accession Taxon NP_001031785 Arabidopsis thaliana NP_567949 ( AT4G34000 ) Arabidopsis thaliana NP_849490 Arabidopsis thaliana
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22952 6.7E-239 11 450 No hit NA SMART SM00338 9.4E-14 370 435 IPR004827 Basic-leucine zipper domain ProSiteProfiles PS50217 10.5 372 417 IPR004827 Basic-leucine zipper domain Pfam PF00170 1.1E-11 374 423 IPR004827 Basic-leucine zipper domain SUPERFAMILY SSF57959 6.9E-10 374 426 No hit NA ProSitePatterns PS00036 NA 377 392 IPR004827 Basic-leucine zipper domain Coils Coil NA 393 428 No hit NA
Mutant Image
abf2abf3abf4 exhibited stay-green phenotypes after ABA treatment
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787