Basic information
Locus name	AT5G09860
Alias	HPR1
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others:disease resistance
Effect for Senescence	delay
Gene Description	HPR1 encodes a putative component of the THO/TREX complex
Evidence	Genetic evidence:Mutant [Ref 1]
References	1: Pan H, Liu S, Tang D HPR1, a component of the THO/TREX complex, plays an important role in disease resistance and senescence in Arabidopsis. Plant J. 2012 Mar;69(5):831-43
Sequence	AT5G09860.1 | Genomic | mRNA | CDS | Protein AT5G09860.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT5G09860.1  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -36.1 kcal/mol  p-value: 0.000148  position: 395  target 5' U               U     U  3'             UGACGAUGAUGAUGA GAUGA                 ACUGCUACUACUACU CUACU      miRNA  3'                 U        5'  target: AT5G09860.2  miRNA: ath-miR414 miRNA: ath-miR414 mfe: -36.1 kcal/mol  p-value: 0.000144  position: 465  target 5' U               U     U  3'             UGACGAUGAUGAUGA GAUGA                 ACUGCUACUACUACU CUACU      miRNA  3'                 U        5'
Ortholog Group
Ortholog Groups: OG5_130504	Accession Taxon NP_568219 ( AT5G09860 ) Arabidopsis thaliana ACO67137 Micromonas sp. RCC299 NP_001048715 Oryza sativa Japonica Group 0200010529 Ostreococcus tauri estExt_gwp_gw1.C_70184 Physcomitrella patens subsp. patens 30040.m000265 Ricinus communis fgenesh1_pg.C_chr_13000311 Thalassiosira pseudonana CCMP1335 XP_002949044 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR13265 1.1E-199 4 577 No hit NA Coils Coil NA 32 60 No hit NA Pfam PF11957 5.1E-126 83 506 IPR021861 THO complex, subunit THOC1 Coils Coil NA 258 279 No hit NA
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787