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Locus name | AT1G74890 |
Organism | Arabidopsis thaliana |
Taxonomic identifier | [NCBI] |
Function category | Hormone response pathway:CK |
Effect for Senescence | Unclear |
Gene Description | Downregulated in senescent leaves. Arabidopsis response regulators type A, ARR15 |
Evidence | Genomic evidence:microarray data [Ref 1] |
References | 1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJComparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.Plant J. 2005 May;42(4):567-85 |
Gene Ontology | |
Pathway | |
Sequence | AT1G74890.1 | Genomic | mRNA | CDS | Protein
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miRNA Interaction | |
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Details | | target: AT1G74890.1 miRNA: ath-miR854a miRNA: ath-miR854a mfe: -29.3 kcal/mol p-value: 0.003048
position: 18 target 5' A U U 3' UCUUCUUCUUUAUCUUC UC AGGAGGAGGGAUAGGAG AG miRNA 3' G U 5'
target: AT1G74890.1 miRNA: ath-miR854b miRNA: ath-miR854b mfe: -29.3 kcal/mol p-value: 0.004158
position: 18 target 5' A U U 3' UCUUCUUCUUUAUCUUC UC AGGAGGAGGGAUAGGAG AG miRNA 3' G U 5'
target: AT1G74890.1 miRNA: ath-miR854c miRNA: ath-miR854c mfe: -29.3 kcal/mol p-value: 0.003140
position: 18 target 5' A U U 3' UCUUCUUCUUUAUCUUC UC AGGAGGAGGGAUAGGAG AG miRNA 3' G U 5'
target: AT1G74890.1 miRNA: ath-miR854d miRNA: ath-miR854d mfe: -29.3 kcal/mol p-value: 0.003100
position: 18 target 5' A U U 3' UCUUCUUCUUUAUCUUC UC AGGAGGAGGGAUAGGAG AG miRNA 3' G U 5'
target: AT1G74890.1 miRNA: ath-miR854e miRNA: ath-miR854e mfe: -29.3 kcal/mol p-value: 0.004174
position: 18 target 5' A U U 3' UCUUCUUCUUUAUCUUC UC AGGAGGAGGGAUAGGAG AG miRNA 3' G U 5'
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Ortholog Group | |
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Ortholog Groups: OG5_137529 | |
Cross Link | |
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Localization 1 | Localization | nucleus | Evidence | Localization with GFP-fusion protein (GFP:cDNA) | Pubmed ID | 10737809 |
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Localization 2 | Localization | nucleus | Evidence | SUBAcon | Pubmed ID | 23180787 |
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