Basic information
Locus name	AT5G25350
Alias	EBF2
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Hormone response pathway:ET
Effect for Senescence	unclear
Gene Description	EIN3-BINDING F BOX PROTEIN 2 (EBF2); FUNCTIONS IN: protein binding; INVOLVED IN: response to ethylene stimulus, negative regulation of ethylene mediated signaling pathway, ubiquitin-dependent protein catabolic process
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding
Sequence	AT5G25350.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_159818	Accession Taxon NP_197917 ( AT5G25350 ) Arabidopsis thaliana NP_565597 Arabidopsis thaliana NP_001046222 Oryza sativa Japonica Group e_gw1.188.74.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_3520009 Physcomitrella patens subsp. patens 28320.m001145 Ricinus communis 29848.m004629 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23125 2.7E-259 1 581 No hit NA SUPERFAMILY SSF81383 1.3E-8 50 92 IPR001810 F-box domain, cyclin-like Pfam PF00646 1.6E-6 54 95 IPR001810 F-box domain, cyclin-like SMART SM00256 6.3E-5 58 100 IPR001810 F-box domain, cyclin-like SUPERFAMILY SSF52047 1.2E-20 154 287 No hit NA SMART SM00367 0.1 166 191 IPR006553 Leucine-rich repeat, cysteine-containing subtype Pfam PF13516 0.0 192 216 No hit NA SMART SM00367 1.5E-7 192 217 IPR006553 Leucine-rich repeat, cysteine-containing subtype Pfam PF13516 1.1 218 241 No hit NA SMART SM00367 0.1 218 243 IPR006553 Leucine-rich repeat, cysteine-containing subtype Pfam PF13516 1.4 244 266 No hit NA SMART SM00367 0.4 244 269 IPR006553 Leucine-rich repeat, cysteine-containing subtype SUPERFAMILY SSF52047 3.7E-29 297 620 No hit NA SMART SM00367 0.0 324 349 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 0.0 350 375 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 440.0 376 401 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 0.0 431 456 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 0.0 457 482 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 27.0 484 509 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 0.0 511 536 IPR006553 Leucine-rich repeat, cysteine-containing subtype Pfam PF13516 0.8 537 560 No hit NA SMART SM00367 100.0 537 561 IPR006553 Leucine-rich repeat, cysteine-containing subtype SMART SM00367 34.0 564 589 IPR006553 Leucine-rich repeat, cysteine-containing subtype
Subcellular Localization
Localization 1 Localization nucleus Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization cytosol Evidence SUBAcon Pubmed ID 23180787