Basic information
Locus name	AT5G46910
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation:JMJ
Effect for Senescence	unclear
Gene Description	transcription factor jumonji (jmj) family protein; FUNCTIONS IN: transcription factor activity; INVOLVED IN: response to chitin, regulation of transcription
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	cellular component nucleus molecular function protein binding
Sequence	AT5G46910.1 | Genomic | mRNA | CDS | Protein
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR10694 1.3E-146 96 645 No hit NA SMART SM00545 1.3E-13 102 143 IPR003349 Transcription factor jumonji, JmjN ProSiteProfiles PS51183 14.0 103 144 IPR003349 Transcription factor jumonji, JmjN Pfam PF02375 1.4E-14 104 136 IPR003349 Transcription factor jumonji, JmjN SUPERFAMILY SSF51197 3.3E-30 181 436 No hit NA SMART SM00558 3.0E-47 247 420 IPR003347 JmjC domain ProSiteProfiles PS51184 37.1 250 420 IPR003347 JmjC domain Pfam PF02373 7.4E-39 280 403 IPR003347 JmjC domain Pfam PF02928 5.6E-10 500 552 IPR004198 Zinc finger, C5HC2-type