Leaf Senescence DataBase

Basic information

Locus name

AT3G09320

Organism

Arabidopsis thaliana

Taxonomic identifier

[NCBI]

Function category

Transcription regulation

Effect for Senescence

unclear

Gene Description

zinc finger (DHHC type) family protein; FUNCTIONS IN: zinc ion binding.

Evidence

Genomic evidence:microarray data [Ref 1]

References

1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology

molecular function

Pathway

KEGG

map00061 (EC 2.3.1.-)
map00253 (EC 2.3.1.-)
map00310 (EC 2.3.1.-)
map00330 (EC 2.3.1.-)
map00340 (EC 2.3.1.-)
map00350 (EC 2.3.1.-)
map00362 (EC 2.3.1.-)
map00540 (EC 2.3.1.-)
map00564 (EC 2.3.1.-)
map00565 (EC 2.3.1.-)
map00604 (EC 2.3.1.-)
map00623 (EC 2.3.1.-)
map00626 (EC 2.3.1.-)
map00627 (EC 2.3.1.-)
map00642 (EC 2.3.1.-)
map00650 (EC 2.3.1.-)
map00903 (EC 2.3.1.-)
map00904 (EC 2.3.1.-)
map00906 (EC 2.3.1.-)
map00942 (EC 2.3.1.-)
map00945 (EC 2.3.1.-)
map00950 (EC 2.3.1.-)
map00960 (EC 2.3.1.-)
map00965 (EC 2.3.1.-)

Sequence

AT3G09320.1 | Genomic | mRNA | CDS | Protein

Ortholog Group

Ortholog Groups: OG5_129585

Accession	Taxon
NP_566348 ( AT3G09320 )	Arabidopsis thaliana
133381	Chlamydomonas reinhardtii
fgenesh1_pg.C_Chr_03.0001000271	Ostreococcus tauri
e_gw1.67.177.1	Physcomitrella patens subsp. patens
gw1.356.18.1	Physcomitrella patens subsp. patens
29568.m000291	Ricinus communis
XP_002945843	Volvox carteri f. nagariensis

Cross Link

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PANTHER	PTHR22883	9.1E-82	6	280	No hit	NA
Pfam	PF01529	1.1E-44	57	218	IPR001594	Zinc finger, DHHC-type, palmitoyltransferase
ProSiteProfiles	PS50216	28.5	97	147	IPR001594	Zinc finger, DHHC-type, palmitoyltransferase