Basic information
Locus name	AT5G58620
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	zinc finger (CCCH-type) family protein; FUNCTIONS IN: transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: endomembrane system.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function nucleic acid binding protein binding zinc ion binding
Sequence	AT5G58620.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_212935	Accession Taxon NP_200670 ( AT5G58620 ) Arabidopsis thaliana 29681.m001358 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR14493 0.0 11 603 No hit NA SUPERFAMILY SSF48403 3.7E-13 54 132 IPR020683 Ankyrin repeat-containing domain Pfam PF12796 1.2E-10 55 124 IPR020683 Ankyrin repeat-containing domain ProSiteProfiles PS50297 13.7 57 132 IPR020683 Ankyrin repeat-containing domain SMART SM00248 0.0 57 87 IPR002110 Ankyrin repeat ProSiteProfiles PS50088 9.3 92 127 IPR002110 Ankyrin repeat SMART SM00248 0.0 92 124 IPR002110 Ankyrin repeat SMART SM00356 4.9E-5 249 275 IPR000571 Zinc finger, CCCH-type Pfam PF00642 4.4E-6 253 274 IPR000571 Zinc finger, CCCH-type ProSiteProfiles PS50103 13.3 254 276 IPR000571 Zinc finger, CCCH-type ProSiteProfiles PS50103 6.2 284 308 IPR000571 Zinc finger, CCCH-type SMART SM00356 20.0 284 307 IPR000571 Zinc finger, CCCH-type