Basic information
Locus name	AT5G20910
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding, zinc ion binding.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding zinc ion binding
Sequence	AT5G20910.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_131493	Accession Taxon NP_197591 ( AT5G20910 ) Arabidopsis thaliana ACO60943 Micromonas sp. RCC299 ACO65165 Micromonas sp. RCC299 NP_001062101 Oryza sativa Japonica Group NP_001063251 Oryza sativa Japonica Group NP_001064906 Oryza sativa Japonica Group e_gw1.295.34.1 Physcomitrella patens subsp. patens 27568.m000265 Ricinus communis 29739.m003656 Ricinus communis 30148.m001402 Ricinus communis fgenesh1_pg.C_chr_7000179 Thalassiosira pseudonana CCMP1335 XP_002948873 Volvox carteri f. nagariensis XP_002956239 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description Coils Coil NA 98 119 No hit NA PANTHER PTHR22763 2.1E-47 139 307 No hit NA SUPERFAMILY SSF57850 7.9E-20 211 277 No hit NA Pfam PF13639 2.2E-13 229 272 IPR001841 Zinc finger, RING-type ProSiteProfiles PS50089 12.2 230 271 IPR001841 Zinc finger, RING-type SMART SM00184 2.5E-5 230 270 IPR001841 Zinc finger, RING-type Coils Coil NA 281 302 No hit NA
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787