Basic information
Locus name	AT5G41350
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding, zinc ion binding.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding zinc ion binding
Sequence	AT5G41350.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_137966	Accession Taxon NP_568590 ( AT5G41350 ) Arabidopsis thaliana NP_001064147 Oryza sativa Japonica Group NP_001067717 Oryza sativa Japonica Group e_gw1.159.58.1 Physcomitrella patens subsp. patens gw1.158.88.1 Physcomitrella patens subsp. patens 30190.m011246 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22937 2.2E-43 3 212 No hit NA SUPERFAMILY SSF57850 4.2E-19 154 208 No hit NA Pfam PF13639 5.6E-13 160 203 IPR001841 Zinc finger, RING-type ProSiteProfiles PS50089 12.5 161 202 IPR001841 Zinc finger, RING-type SMART SM00184 1.2E-6 161 201 IPR001841 Zinc finger, RING-type
Subcellular Localization
Localization 1 Localization mitochondria Evidence Localization with GFP-fusion protein (GFP:cDNA) Pubmed ID 10737809
Localization 2 Localization nucleus Evidence SUBAcon Pubmed ID 23180787