Basic information
Locus name	AT3G46620
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Transcription regulation
Effect for Senescence	unclear
Gene Description	zinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: ubiquitin-protein ligase activity, protein binding, zinc ion binding.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function protein binding zinc ion binding
Sequence	AT3G46620.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_144377	Accession Taxon NP_030517 Arabidopsis thaliana NP_190246 ( AT3G46620 ) Arabidopsis thaliana NP_568910 Arabidopsis thaliana NP_974274 Arabidopsis thaliana ACO66379 Micromonas sp. RCC299 NP_001054437 Oryza sativa Japonica Group 29568.m000284 Ricinus communis 29751.m001902 Ricinus communis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR22763 3.0E-79 13 336 No hit NA Pfam PF14369 6.5E-16 29 65 No hit NA SUPERFAMILY SSF57850 5.3E-20 195 262 No hit NA Pfam PF13639 2.7E-13 214 256 IPR001841 Zinc finger, RING-type ProSiteProfiles PS50089 12.2 215 256 IPR001841 Zinc finger, RING-type SMART SM00184 5.7E-6 215 255 IPR001841 Zinc finger, RING-type Pfam PF06547 9.5E-36 273 389 IPR010543 Domain of unknown function DUF1117
Subcellular Localization
Localization	nucleus
Evidence	SUBAcon
Pubmed ID	23180787