Basic information   
Locus name AT3G45580
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryTranscription regulation
Effect for Senescenceunclear
Gene Descriptionzinc finger (C3HC4-type RING finger) family protein; FUNCTIONS IN: protein binding, zinc ion binding; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type, conserved site (InterPro:IPR017907), Zinc finger, C6HC-type (InterPro:IPR002867), Zinc finger, RING-type (InterPro:IPR001841); BEST Arabidopsis thaliana protein match is: zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G45570.1); Has 2218 Blast hits to 2200 proteins in 156 species: Archae - 0; Bacteria - 2; Metazoa - 1093; Fungi - 386; Plants - 370; Viruses - 1; Other Eukaryotes - 366 (source: NCBI BLink).
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

Gene Ontology
molecular function
SequenceAT3G45580.1 | Genomic | mRNA | CDS | Protein
Ortholog Group      
Ortholog Groups: OG5_144592
AccessionTaxon
NP_180182Arabidopsis thaliana
NP_189904Arabidopsis thaliana
NP_189961Arabidopsis thaliana
NP_190132Arabidopsis thaliana
NP_190134Arabidopsis thaliana
NP_190137Arabidopsis thaliana
NP_190140Arabidopsis thaliana
NP_190142Arabidopsis thaliana
NP_190143Arabidopsis thaliana
NP_190144 ( AT3G45580 ) Arabidopsis thaliana
NP_973536Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR116854.4E-1921398No hitNA
PfamPF134566.6E-1173155No hitNA
SUPERFAMILYSSF578502.2E-11170252No hitNA
PfamPF000976.5E-4173206IPR018957Zinc finger, C3HC4 RING-type
ProSiteProfilesPS500899.2173217IPR001841Zinc finger, RING-type
ProSitePatternsPS00518NA192201IPR017907Zinc finger, RING-type, conserved site
SMARTSM006474.3E-25241308IPR002867Zinc finger, C6HC-type
PfamPF014851.7E-10252308IPR002867Zinc finger, C6HC-type
SUPERFAMILYSSF578504.9E-7255312No hitNA
SMARTSM006470.1321376IPR002867Zinc finger, C6HC-type
SUPERFAMILYSSF578502.3E-14322379No hitNA
PfamPF014852.9E-8328369IPR002867Zinc finger, C6HC-type