Basic information
Locus name	AT3G57410
Alias	VLN3
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	VILLIN 3 (VLN3); FUNCTIONS IN: actin binding; INVOLVED IN: cytoskeleton organization
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Gene Ontology	molecular function actin binding
Sequence	AT3G57410.1 | Genomic | mRNA | CDS | Protein
Ortholog Group
Ortholog Groups: OG5_127042	Accession Taxon NP_001031444 Arabidopsis thaliana NP_029567 Arabidopsis thaliana NP_194745 Arabidopsis thaliana NP_200542 Arabidopsis thaliana NP_565958 Arabidopsis thaliana NP_567048 ( AT3G57410 ) Arabidopsis thaliana 190925 Chlamydomonas reinhardtii ACO67931 Micromonas sp. RCC299 NP_001050140 Oryza sativa Japonica Group NP_001053784 Oryza sativa Japonica Group NP_001054676 Oryza sativa Japonica Group NP_001058263 Oryza sativa Japonica Group NP_001061335 Oryza sativa Japonica Group e_gw1.20.9.1 Physcomitrella patens subsp. patens e_gw1.299.1.1 Physcomitrella patens subsp. patens estExt_gwp_gw1.C_1000008 Physcomitrella patens subsp. patens 29681.m001333 Ricinus communis estExt_fgenesh1_pg.C_chr_60115 Thalassiosira pseudonana CCMP1335 XP_002958779 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR11977 0.0 1 965 IPR007122 Villin/Gelsolin SUPERFAMILY SSF55753 2.8E-39 9 148 No hit NA SMART SM00262 1.5E-25 19 117 IPR007122 Villin/Gelsolin Pfam PF00626 1.1E-15 28 111 IPR007123 Gelsolin domain SMART SM00262 2.8E-24 137 234 IPR007122 Villin/Gelsolin SUPERFAMILY SSF55753 6.4E-19 139 239 No hit NA Pfam PF00626 1.1E-9 153 204 IPR007123 Gelsolin domain SUPERFAMILY SSF55753 6.9E-23 223 345 No hit NA SMART SM00262 6.6E-25 252 344 IPR007122 Villin/Gelsolin Pfam PF00626 4.1E-14 270 337 IPR007123 Gelsolin domain PRINTS PR00597 4.6E-54 323 344 IPR007122 Villin/Gelsolin SUPERFAMILY SSF55753 6.8E-30 383 528 No hit NA SMART SM00262 2.6E-18 392 490 IPR007122 Villin/Gelsolin PRINTS PR00597 4.6E-54 411 427 IPR007122 Villin/Gelsolin Pfam PF00626 3.8E-11 412 484 IPR007123 Gelsolin domain PRINTS PR00597 4.6E-54 437 455 IPR007122 Villin/Gelsolin PRINTS PR00597 4.6E-54 470 490 IPR007122 Villin/Gelsolin SUPERFAMILY SSF55753 3.7E-21 511 616 No hit NA SMART SM00262 5.3E-21 520 607 IPR007122 Villin/Gelsolin Pfam PF00626 4.8E-9 533 601 IPR007123 Gelsolin domain PRINTS PR00597 4.6E-54 533 553 IPR007122 Villin/Gelsolin PRINTS PR00597 4.6E-54 593 612 IPR007122 Villin/Gelsolin SUPERFAMILY SSF55753 3.0E-22 596 718 No hit NA SMART SM00262 6.2E-18 623 719 IPR007122 Villin/Gelsolin PRINTS PR00597 4.6E-54 645 667 IPR007122 Villin/Gelsolin PRINTS PR00597 4.6E-54 674 693 IPR007122 Villin/Gelsolin ProSiteProfiles PS51089 19.9 900 965 IPR003128 Villin headpiece SUPERFAMILY SSF47050 5.2E-20 903 965 IPR003128 Villin headpiece Pfam PF02209 5.0E-16 930 965 IPR003128 Villin headpiece SMART SM00153 6.2E-18 930 965 IPR003128 Villin headpiece
Subcellular Localization
Localization	cytosol
Evidence	SUBAcon
Pubmed ID	23180787