Basic information   
Locus name AT4G05590
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryOthers
Effect for Senescenceunclear
Gene Descriptionunknown protein
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston
High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation.
Plant Cell 2011 Mar;23(3):873-94

SequenceAT4G05590.1 | Genomic | mRNA | CDS | Protein
AT4G05590.2 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
CD: Cell Death, ratio of starved cell suspension culture/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_127980
AccessionTaxon
NP_001031587 ( AT4G05590 ) Arabidopsis thaliana
NP_193962Arabidopsis thaliana
NP_567306Arabidopsis thaliana
NP_567439Arabidopsis thaliana
CMB099CCyanidioschyzon merolae strain 10D
111398Chlamydomonas reinhardtii
ACO68537Micromonas sp. RCC299
NP_001059546Oryza sativa Japonica Group
NP_001061597Oryza sativa Japonica Group
fgenesh1_pm.C_Chr_05.0001000016Ostreococcus tauri
e_gw1.270.84.1Physcomitrella patens subsp. patens
estExt_fgenesh1_pg.C_880028Physcomitrella patens subsp. patens
29842.m003513Ricinus communis
e_gw1.4.695.1Thalassiosira pseudonana CCMP1335
XP_002954668Volvox carteri f. nagariensis
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
PANTHERPTHR141549.5E-431146No hitNA
PfamPF036502.1E-17567IPR005336Uncharacterised protein family UPF0041
PfamPF036507.7E-991139IPR005336Uncharacterised protein family UPF0041
Subcellular Localization   
Localizationmitochondrion
EvidenceSUBAcon
Pubmed ID23180787