Basic information
Locus name	AT4G38360
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Others
Effect for Senescence	unclear
Gene Description	unknown protein
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Breeze E, Harrison E, McHattie S, Hughes L, Hickman R, Hill C, Kiddle S, Kim YS, Penfold CA, Jenkins D, Zhang C, Morris K, Jenner C, Jackson S, Thomas B, Tabrett A, Legaie R, Moore JD, Wild DL, Ott S, Rand D, Beynon J, Denby K, Mead A, Buchanan-Wollaston High-resolution temporal profiling of transcripts during Arabidopsis leaf senescence reveals a distinct chronology of processes and regulation. Plant Cell 2011 Mar;23(3):873-94
Sequence	AT4G38360.1 | Genomic | mRNA | CDS | Protein AT4G38360.2 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT4G38360.1  miRNA: ath-miR5658 miRNA: ath-miR5658 mfe: -35.3 kcal/mol  p-value: 0.000068  position: 205  target 5' A                   C  3'             UUCAUCAUCAUCAUCAUCA                 AAGUAGUAGUAGUAGUAGU      miRNA  3' A                   A  5'  target: AT4G38360.2  miRNA: ath-miR5658 miRNA: ath-miR5658 mfe: -35.3 kcal/mol  p-value: 0.000067  position: 205  target 5' A                   C  3'             UUCAUCAUCAUCAUCAUCA                 AAGUAGUAGUAGUAGUAGU      miRNA  3' A                   A  5'
Ortholog Group
Ortholog Groups: OG5_126850	Accession Taxon NP_001078625 Arabidopsis thaliana NP_187245 Arabidopsis thaliana NP_565152 Arabidopsis thaliana NP_850871 Arabidopsis thaliana NP_974706 ( AT4G38360 ) Arabidopsis thaliana NP_974836 Arabidopsis thaliana CMS448C Cyanidioschyzon merolae strain 10D 126669 Chlamydomonas reinhardtii 78039 Chlamydomonas reinhardtii ACO63372 Micromonas sp. RCC299 ACO66310 Micromonas sp. RCC299 NP_001047693 Oryza sativa Japonica Group NP_001056049 Oryza sativa Japonica Group NP_001058631 Oryza sativa Japonica Group NP_001059278 Oryza sativa Japonica Group 0000920002 Ostreococcus tauri gw1.05.00.235.1 Ostreococcus tauri e_gw1.142.26.1 Physcomitrella patens subsp. patens e_gw1.219.72.1 Physcomitrella patens subsp. patens e_gw1.43.179.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_130201 Physcomitrella patens subsp. patens estExt_Genewise1.C_4500020 Physcomitrella patens subsp. patens gw1.31.131.1 Physcomitrella patens subsp. patens gw1.42.200.1 Physcomitrella patens subsp. patens gw1.58.62.1 Physcomitrella patens subsp. patens 27985.m000867 Ricinus communis 30122.m000346 Ricinus communis 30128.m009002 Ricinus communis estExt_Genewise1.C_chr_150123 Thalassiosira pseudonana CCMP1335 gw1.3.293.1 Thalassiosira pseudonana CCMP1335 gw1.7.223.1 Thalassiosira pseudonana CCMP1335 XP_002947847 Volvox carteri f. nagariensis XP_002950674 Volvox carteri f. nagariensis XP_002954851 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23423 7.8E-173 14 450 IPR005178 Organic solute transporter Ost-alpha Pfam PF03619 5.5E-103 18 301 IPR005178 Organic solute transporter Ost-alpha Coils Coil NA 388 416 No hit NA