Basic information
Locus name	AT4G29010
Organism	Arabidopsis thaliana
Taxonomic identifier	[NCBI]
Function category	Lipid/Carbohydrate metabolism:fatty acid catabolism
Effect for Senescence	Unclear
Gene Description	Fatty acid multifunctional protein (AIM1). Upregulated in senescent leaves.
Evidence	Genomic evidence:microarray data [Ref 1]
References	1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J. 2005 May;42(4):567-85
Gene Ontology	biological process fatty acid metabolic process metabolic process oxidation-reduction process molecular function 3-hydroxyacyl-CoA dehydrogenase activity catalytic activity oxidoreductase activity
Pathway	KEGG map00062 (EC 4.2.1.17) map00071 (EC 5.1.2.3) map00120 (EC 1.1.1.35) map00280 (EC 4.2.1.17) map00281 (EC 4.2.1.17) map00310 (EC 4.2.1.17) map00362 (EC 4.2.1.17) map00380 (EC 4.2.1.17) map00410 (EC 4.2.1.17) map00592 (EC 4.2.1.17) map00623 (EC 1.1.1.35) map00627 (EC 4.2.1.17) map00640 (EC 4.2.1.17) map00650 (EC 5.1.2.3) map00903 (EC 4.2.1.17) map00930 (EC 4.2.1.17) MetaCyc PWY-1361 PWY-5109 PWY-5136 PWY-5138 PWY-5789 PWY-6435 PWY-735
Sequence	AT4G29010.1 | Genomic | mRNA | CDS | Protein
miRNA Interaction
Details	target: AT4G29010.1  miRNA: ath-miR869 miRNA: ath-miR869 mfe: -22.6 kcal/mol  p-value: 0.075013  position:  1749  target 5' G                   C 3'             GACA CGGGAUUGGAUUAG              UUGU GUCUUAACUUGGUU   miRNA  3' G    G              A 5'
Ortholog Group
Ortholog Groups: OG5_127588	Accession Taxon NP_187342 Arabidopsis thaliana NP_194630 ( AT4G29010 ) Arabidopsis thaliana CMR380C Cyanidioschyzon merolae strain 10D 132158 Chlamydomonas reinhardtii ACO65308 Micromonas sp. RCC299 NP_001042973 Oryza sativa Japonica Group NP_001046536 Oryza sativa Japonica Group NP_001054687 Oryza sativa Japonica Group fgenesh1_pm.C_Chr_03.0001000088 Ostreococcus tauri e_gw1.75.86.1 Physcomitrella patens subsp. patens estExt_Genewise1.C_1650020 Physcomitrella patens subsp. patens estExt_fgenesh1_pg.C_2830048 Physcomitrella patens subsp. patens 29726.m004067 Ricinus communis 29912.m005496 Ricinus communis 35567.m000014 Ricinus communis estExt_fgenesh1_pm.C_chr_100011 Thalassiosira pseudonana CCMP1335 estExt_thaps1_ua_kg.C_chr_20331 Thalassiosira pseudonana CCMP1335 XP_002949054 Volvox carteri f. nagariensis XP_002959988 Volvox carteri f. nagariensis
Cross Link
Database Entry ID E-value Start End InterPro ID Description PANTHER PTHR23309 1.7E-262 5 705 No hit NA SUPERFAMILY SSF52096 6.0E-63 7 299 No hit NA Pfam PF00378 9.2E-55 13 251 IPR001753 Crotonase superfamily ProSitePatterns PS00166 NA 103 123 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site SUPERFAMILY SSF51735 1.6E-53 308 490 No hit NA Pfam PF02737 9.9E-59 311 489 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ProSitePatterns PS00067 NA 489 513 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site Pfam PF00725 6.2E-20 492 585 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal SUPERFAMILY SSF48179 4.7E-21 492 602 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like SUPERFAMILY SSF48179 2.1E-19 619 708 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like
Subcellular Localization
Localization	peroxisome
Evidence	SUBAcon
Pubmed ID	23180787