Basic information   
Locus name AT3G55970
OrganismArabidopsis thaliana
Taxonomic identifier[NCBI]
Function categoryRedox regulation:flavonoid biosynthesis
Effect for SenescenceUnclear
Gene DescriptionLeucoanthocyanidin dioxygenase. Upregulated in senescent leaves.
EvidenceGenomic evidence:microarray data [Ref 1]
References
1: Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4):567-85

Gene Ontology
biological process
molecular function
SequenceAT3G55970.1 | Genomic | mRNA | CDS | Protein
Microarray   
Sampling Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin JF, Wu SH, Swidzinski J, Ishizaki K, Leaver CJ.
Comparative transcriptome analysis reveals significant differences in gene expression and signalling pathways between developmental and dark/starvation-induced senescence in Arabidopsis.
Plant J. 2005 May;42(4)
Comparation Legends:
Col: wild type, indicates the ratio of expression in senescing leaves/green leaves.
NahG, coi1 and ein2: indicates the ratio of expression in senescing leaves of mutant/senescing wild type.
D/L: ratio of DARK 5d/control.
Genes showing at least 3 fold (ratio) up regulation during leaf senescence.
Ortholog Group      
Ortholog Groups: OG5_136977
AccessionTaxon
NP_191156 ( AT3G55970 ) Arabidopsis thaliana
Cross Link      
DatabaseEntry IDE-valueStartEndInterPro IDDescription
SUPERFAMILYSSF511972.9E-10611347No hitNA
PANTHERPTHR102091.4E-15014362No hitNA
PfamPF142262.7E-2852163IPR026992Non-haem dioxygenase N-terminal domain
PRINTSPR006823.4E-67592IPR002283Isopenicillin N synthase
ProSiteProfilesPS5147114.8210312IPR005123Oxoglutarate/iron-dependent dioxygenase
PfamPF031716.3E-25214312IPR005123Oxoglutarate/iron-dependent dioxygenase
PRINTSPR006823.4E-6272298IPR002283Isopenicillin N synthase